Phormidium sp. PBR-2020: JWS08_10015
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Entry
JWS08_10015 CDS
T07578
Name
(GenBank) sigma 54-interacting transcriptional regulator
Organism
phor
Phormidium sp. PBR-2020
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
cNMP_binding
Fer4_5
Sigma54_activ_2
Fer4
Fer4_2
Fer4_6
Fer4_10
DUF3382
Fer4_9
Fer4_7
Fer4_17
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
UCJ14021
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Position
complement(2315162..2317681)
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AA seq
839 aa
AA seq
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MIGAERITWLKTHTILQKLSEAALADLNDLLSDRHLAKDDVLSQADQPPDGIYILHQGQL
QSDRPQGSYCLTAGTVLHLQDLLLDRNSNETLTALSESQLWQISREDFSHLLDRHNEISR
LFSQQLAEELDRVSAELSYERERQSELRPYLVNRIRRGIIGTSRYAVRLRQSIKKAAKTR
DSVLIFGEPGLEKDNMASLIHYGSPQRREPMIQLTSGLLQTSGAELFGRSNGKPGLLEWL
GEGTLVLNNIQDLPDELREPIAQLLTTRTYHPVSRDPQTQPVSCSCNARIILISERAAPE
FSNCVAQSIKVPPVRVRKTDIKALLDYNLSLCCRSRGIPKPRITPEAIRRLQSYDFPNNL
RELSSLVKRAVTQADGADELTEELFWSQDNKKTRLRLNLFKSYPQLREFLRGTFWTDGLN
YGITTWVFALVVILLFVGPQTRDQNVALNLFWAWWWPLILLGFPFVGRLWCAICPFMIYG
ELSQKLSLKLFPRKLKPWQRQAAERWGGWFLFGLFALIFLWEELWHLQNTAYLSSCLLLL
ITAGAVIFSLLFERRFWCRYLCPIGGMNGLFAKLSMTELRAQTGICSAECTTYQCYKGGP
EKGEGQETEGCPLYSHPAQLQDNRDCVLCMTCLKACPHRSVELNLRPPGIELWTTHTPHS
YEVALLFLLLGGVFLRRLPELQGLLGWSFNLGSFGQHLEVSLLALLLPAIAPLVAYGLIQ
GIHRLWNSPKPKPFITLAYGYLPLVWGGNLAHYLHLGLGEAGRVLPVTLATFGMSGANLP
IWVADPAVISFLQGTLLIVSTLLSVILTQKIARKSWRFLLPQHLSAIALGWSLWAVILP
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgataggtgcagagcgaattacctggctcaaaacccataccattctccaaaaactttct
gaggcggccctggcggacttgaacgacctgctgagcgatcgccacctggccaaggatgat
gttctcagccaagccgatcagccccccgacggcatttatattctccaccagggtcaactc
caaagcgatcgcccccaaggctcctattgcctcaccgctggaaccgttctgcacctgcaa
gatctcctcttagaccgtaacagcaacgaaaccctaaccgccctaagcgagagccaactt
tggcagatttcccgagaagactttagccatctcctcgatcgccacaacgaaatctcacgg
ctattttcccaacaactggccgaagaactcgatcgcgtctccgccgaactcagctacgag
cgagaacgtcaaagcgaactgcggccctatctcgtcaaccgtattcgtcgcggcatcatc
ggcaccagtcgttacgccgtgcgtttgcgacaaagcatcaaaaaagccgccaaaacccga
gactcggttctgattttcggcgaaccgggcctggaaaaagacaacatggccagcctgatt
cactacggttccccccaacggcgagaaccaatgattcaactcaccagtggcctgctacaa
accagtggtgccgaactgtttgggcgatccaacggtaaaccgggcctcctagaatggcta
ggagaaggcactctggttctcaacaacatccaagatctgcccgatgaattgcgagagcca
attgcccaactcctgacaacccgaacctatcaccccgtctcccgcgatccccaaacccaa
cccgtcagctgctcttgcaacgcccgcatcatcctaatttctgaacgagccgccccagaa
tttagcaactgcgttgcccaaagcatcaaagttcccccagttcgggttcgcaaaaccgac
atcaaagccctcctcgactacaacctgagtctctgctgtcgcagtcgcggcatccccaaa
cccagaatcacccccgaagccatccgtcgcctacaatcctacgactttcccaacaattta
cgggaactcagtagtctagttaaacgagccgttacccaagccgatggcgccgacgaactc
accgaagaactgttttggtctcaggacaacaaaaaaacccggctgcgcctcaacctcttt
aaaagctaccctcaacttcgagaatttttacgagggacgttctggactgatgggctgaac
tatggcattacaacctgggtgtttgccctagttgtcattctcttatttgtgggaccccaa
acccgagaccaaaatgttgccttaaatctattttgggcttggtggtggcccctaatatta
ctagggtttcccttcgtaggacgactctggtgtgccatttgtccctttatgatttatgga
gaactcagtcaaaaactctccctaaaactatttcctagaaagttgaaaccctggcagaga
caagccgctgaacggtggggaggctggtttttatttggactctttgccttgattttcctt
tgggaagaactctggcatctccaaaataccgcctacttatccagttgtttgttgctctta
attaccgcaggagctgtaattttttctctgttgtttgagcgacgattttggtgtcgttac
ctttgcccaatcgggggaatgaatggcttatttgccaagctttccatgaccgagttgcgg
gcccaaacggggatttgttccgctgaatgtactacttatcaatgttataaagggggtccc
gaaaaaggggaaggtcaagagactgagggctgtcctctctattcccatccggctcaactg
caagataaccgagactgtgtgctgtgtatgacctgtctcaaagcctgtccccatcgatca
gtagaattgaacctacggccaccagggattgaactctggacaacccatactccccatagc
tatgaggtggcgttactgtttttactcctcggcggggtgtttctgcggcggctaccggaa
ctgcaagggctgttagggtggtcgtttaacctgggtagctttgggcagcatttagaagtc
tcattgttggccttactgttgccagcgatcgcccccctagtcgcctatggactcatacag
ggcattcaccggctctggaacagccccaaacccaagccctttataacattagcctatggc
tatcttcccctggtctgggggggcaatttagcccattatctgcacttaggcttaggggaa
gccgggcgtgtcttaccagtgaccctagccacctttggtatgagtggagccaacctgccc
atctgggtagcagacccggcagtcatcagcttcttacaaggaaccctcctgattgtctca
accctcttaagcgtgatcctgacccagaaaattgcccgtaaatcctggcgcttcttgctg
ccacaacacctgagtgcgatcgccctcggctggagtctctgggcagtcattctcccttaa
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