Phormidium sp. PBR-2020: JWS08_10690
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Entry
JWS08_10690 CDS
T07578
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03030
DNA replication
phor03430
Mismatch repair
phor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JWS08_10690
03430 Mismatch repair
JWS08_10690
03440 Homologous recombination
JWS08_10690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phor03032
]
JWS08_10690
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_10690
Enzymes [BR:
phor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JWS08_10690
DNA replication proteins [BR:
phor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JWS08_10690
DNA repair and recombination proteins [BR:
phor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JWS08_10690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DnaA_N-like_STI
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
AAA_22
AAA_30
AAA_19
RuvB_N
TIP49
AAA_5
AAA_16
EF-hand_9
AAA_24
AAA_18
RCF1-5-like_lid
AAA_14
Motif
Other DBs
NCBI-ProteinID:
UCJ14131
LinkDB
All DBs
Position
2449506..2451557
Genome browser
AA seq
683 aa
AA seq
DB search
MVYEPLHHKYRPATFADLVGQSAIASTLTNAIRQERIAPAYLFCGPRGTGKTSSARIFAK
SLNCLASDRPTETPCGTCDACRSIARGSALDVIEIDAASNTGVDNIRELIERAQFAPVQA
RYKVYIIDECHMLSTAAFNSLLKTLEEPPAHVIFILATTDPQRVLPTIISRCQRFDYRRI
ALDAMTGHLRYIAEQEAIAITDDALTLIAQLAQGGLRDAESVLDQLSLLPEEIDVERVWD
LVGAVPEQDLLTLLEAIAQNNPQHVLEQCRYLLDRGREPPIVMQNLAAFYRDLLIAKTAP
HRNDLVTVTAQTWESLCQFAQQWDERLILAGSQHLRSCDPQVRQTTQPRLWLEVTLLGLL
PVNLQPPQTPPANVPLASAQAVSPPMAPVAPVAAAVAPAHTPQAPVQPAIPPTPAPQAPV
QPRAIPQAARTQTPSPTPPSQEPVPSPSPTSPDSAPEAIGSYNLPHIWQQVLENIEFRAT
RELLRQQGHLLQFDGQTAQIGVAKALIKMAETKVPDIEAAFQTTLQTTIRVKIGPTQGQV
RGPSAPAPNPQASPPSPAVVTPPSPTHTVPESSEPARGTMTVDAPPWEGSASVASQPPQT
APMESNGQSQSPGTVAAEAIQGANEDQVESATPTQLGSMAAAVDPQGSQDTWEVDKLHQV
AQQFAQFFNGDVVDLDDDLDLEL
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtggtttatgagcctttacaccacaaatatcgtcctgccacctttgccgatctcgttgga
cagtcggcgatcgccagtaccttaaccaatgccattcgccaggaacggattgccccggct
tatctattctgcgggcctcggggaactgggaaaacctcaagcgcccgtattttcgccaaa
tccctgaattgcctagccagcgatcgccccaccgaaaccccctgcggaacctgtgacgct
tgccgtagcattgcccgaggttcagccctcgatgtcattgaaattgacgccgccagtaac
accggcgttgataacattcgagaactcattgaacgggcccaattcgccccagtccaagcc
cgttacaaagtctatattattgacgaatgccatatgctcagcacagcggcattcaactcc
ctcttaaaaaccctagaagaacctccagctcacgttatcttcatcctcgcaaccaccgat
ccccagcgagttttacccaccattatttctcgctgtcaacggtttgactatcggcgcatt
gccctcgatgcgatgaccgggcatttgcgctatattgccgagcaagaagccatcgccatc
accgatgatgcccttaccctgattgcgcaactggctcagggcggattgcgagatgccgag
agtgttctcgatcaactgagcttattacctgaagaaatcgacgtcgaacgagtctgggat
ttagtcggtgccgtccccgaacaagatttgctgaccttacttgaggcgatcgcccaaaat
aaccctcaacacgtcttagaacaatgtcgctatctcctcgatcgcggacgagaacccccc
attgtcatgcaaaatctcgccgccttctatcgcgacttactcattgccaaaactgccccc
caccgcaacgatctcgttaccgtgacggcccaaacctgggaatccctctgtcagttcgcc
cagcagtgggacgaacgcctcattctggctggttcccagcatttacgcagctgcgaccct
caggttcgccagaccacccaaccccgtctctggttagaagttaccttactggggttactt
ccggtgaacttacagccgccccaaactcccccagctaacgttcccctggcctcagcccaa
gcggtatcaccccccatggctcctgtcgctcccgtagcagcggctgtagctcctgctcac
acgcctcaagctcccgttcaacccgccatcccccccaccccagcacctcaagctcccgtt
caacccagagccatcccacaagccgccaggactcagaccccaagtcctacccccccaagc
caagagccggtccccagcccttccccaacctctccagactctgcacccgaagccataggc
tcctataacctgccccacatttggcagcaagtcctggaaaatatcgaattccgggcgacc
cgagaactcttacgccaacaagggcatttgctgcaatttgatggtcaaaccgcccaaatt
ggcgtagcgaaagccctaatcaaaatggcagaaacgaaagttcctgatattgaagcggcg
ttccagaccaccctacagacaaccatccgcgtcaaaattggccccacccaagggcaggtt
cgaggtcccagtgcccctgcacccaatccccaagcctcgccgccttccccagccgttgtt
acccctccgtcgccaactcacacagtcccagagtcctctgaaccagctagaggcacaatg
acggtagatgctcctccctgggaagggtcggcatccgtcgcgagccaaccaccccagacg
gctcccatggagagtaatggccagtctcagtccccaggaactgttgcggctgaggctatc
caaggtgccaatgaggatcaggttgagtccgcgaccccaactcaactggggtctatggct
gctgctgttgaccctcaaggctctcaagacacttgggaagttgacaaactccatcaggtg
gctcaacaatttgcccagttctttaatggcgatgtggtggatttagacgatgacctggac
ttggaactttag
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