Phormidium sp. PBR-2020: JWS08_12825
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Entry
JWS08_12825 CDS
T07578
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00730
Thiamine metabolism
phor01100
Metabolic pathways
phor01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
JWS08_12825 (thiC)
Enzymes [BR:
phor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
JWS08_12825 (thiC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
DUF2322
Motif
Other DBs
NCBI-ProteinID:
UCJ10717
LinkDB
All DBs
Position
complement(2938414..2939802)
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AA seq
462 aa
AA seq
DB search
MRTDWVAKRRGQGNVSQMHYARQGVITEEMNYVAKRENLPQELIRDEVARGRMIIPANIN
HTNLEPMAIGIASKCKVNANIGASPNSSNIDEEVAKLNLAVKYGADTVMDLSTGGGDLDV
IRTAIIKASPVPIGTVPIYQALESVHGSVENLSADDFLHIIEKHAQQGVDYMTIHAGILI
EHLPLVRDRITGIVSRGGGILARWMLHHHKQNPLYTHFDDIIEIFKKYDVSFSLGDSLRP
GCTHDASDEAQLAELKTLGQLTRRAWEHDVQVMVEGPGHVPMDQIEFNVKKQMEECSEAP
FYVLGPLVTDIAPGYDHITSAIGAAMAGWYGTAMLCYVTPKEHLGLPDAEDVRNGLIAYK
IAAHAADIARRRPGARDRDDELSAARYNFDWNKQFELSLDPERAREYHDETLPADIYKSA
EFCSMCGPKFCPMQTKVDADALTELEKFLASDDAQEKAVAKA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacagactgggtagctaagcgacgcggtcagggtaatgtatcccagatgcactac
gctcgtcagggagtcattactgaggagatgaactatgtcgccaagcgggaaaatctccct
caggagttaatccgcgacgaggtggcccggggccggatgattattccggccaacatcaac
cacactaacctcgaaccgatggccattggcattgcatcgaaatgcaaagtcaacgccaac
attggtgcatctcccaactcatccaatattgatgaggaagtggcgaaactcaatttggcg
gtgaagtatggtgcggacaccgtcatggacttgtccaccggtggcggggacttggatgtg
attcgcacggccattatcaaggcctctccggttcccattggtacggttccgatttaccag
gcccttgagagtgtccatgggagtgtggaaaatctttccgccgatgacttcctgcatatc
attgagaaacacgctcagcagggtgtggactacatgacgattcatgcgggaatcttgatt
gaacatctgccgttggtgcgcgatcgcattacggggattgtctctcgcggtggcggaatc
ctggcccgctggatgttacatcaccacaagcaaaaccccctctatactcactttgacgac
atcatcgaaatcttcaagaaatacgatgtgtcgttcagtttaggggattctctgcgtccg
ggttgtacccatgatgccagtgatgaagcgcaattggcggagttgaaaaccctaggacag
ttgacacgccgcgcctgggaacatgatgttcaggtgatggtggaaggcccgggccatgtg
ccgatggatcagattgagttcaacgtcaagaaacagatggaggagtgcagcgaagcaccc
ttctatgtgttgggtcccttggtgacggatattgcgccggggtatgaccatattacctct
gccattggtgcagcgatggccggttggtatggaacggcgatgttgtgctatgtgacgccg
aaggagcatttggggttaccggatgctgaggatgtgcgcaatggcttgattgcctataag
attgcggctcatgcggcggatattgcccgtcgtcgtccgggagcgcgcgatcgcgatgat
gaactctcggcggcgcggtataacttcgactggaacaagcagtttgagttatccctcgat
cctgaacgcgctcgggaataccatgatgagacgcttccggcggatatctacaagtcggcg
gagttctgctcgatgtgtggaccgaagttctgtcccatgcagacgaaggtggatgcggat
gcgttgacggaactggagaagttcttggcgtccgatgatgctcaggagaaagcggtggcc
aaggcgtaa
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