Phormidium sp. PBR-2020: JWS08_13160
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Entry
JWS08_13160 CDS
T07578
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phor03400
]
JWS08_13160
Enzymes [BR:
phor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JWS08_13160
DNA repair and recombination proteins [BR:
phor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JWS08_13160
Prokaryotic type
JWS08_13160
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UCJ10778
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All DBs
Position
3008577..3010013
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AA seq
478 aa
AA seq
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MTDLVLFWHRRDLRLTDNLGLAEARQRSAKLIPLFCFDPHILERDDIAPARMAYLLGCLE
SLEHRYRQVGGRLLFLQGKPEEKIPQLADLLGARAVYWNQDVEPYSRERDRRVKERLTQQ
GVEVHERWDQLLHAPGEVLTGTSNNCKPYTVYTPYWKNWSRQPKEKPVPSPEPLEMLSER
DEQKLETVGAIALPSLKDLGFAWDAPLILEPGEAVAKAQLESFCLRGIYSYDEQRNYPFN
DGTSRLSPALKFGAIGIRDVWAATESAMENARSDETRDHILTWQQELAWREFYQTVMYFF
PELAQGPYREPWNRFPWHNDEQKFAAWCEGKTGFPIVDAAMRQLNQTGWMHNRCRMIVAS
FLTKDLMIDWQWGEKYFMQHLIDGDLSANNGGWQWSASSGMDPKPLRIFNPASQAKKYDP
QAEYIRYWLPEIRSLETKDLVTGNISPLDCEACGYPQAIVNHNEQQRLFKQIYKDLKS
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactgacctggttttattttggcatcgccgagacttacggctgacggataatcttggc
ttggctgaggcgagacaacggagtgcaaaactcattcccttattttgtttcgatccgcat
atcctggaacgagatgatattgctcctgctcgtatggcctatcttctgggctgtttagag
tctttagaacatcgctaccgtcaagttggtggacgcttgctgtttttacagggaaagccg
gaggaaaaaatacctcaattggcggacctgttaggggccagggctgtctattggaatcag
gatgtagaaccctatagccgggaacgcgatcgccgagttaaggaacgattaacccagcag
ggggttgaggttcacgaacgttgggatcaattgctccatgctccgggtgaagtattaaca
ggaaccagtaacaactgtaagccttataccgtttatactccctattggaaaaattggagc
cgtcagcctaaagagaaacccgtgccgagtccagagccgttagagatgctcagcgaaaga
gacgagcagaagctggaaaccgtgggagcgatcgccctgcctagcttaaaagatttaggc
tttgcttgggatgcacctctaatcttagaaccaggagaagcggttgcaaaagcacaatta
gagtcgttttgtcttcgaggtatttatagttacgatgagcaacgaaactatccctttaat
gatggaacctctcgtctgagtccagctttaaagttcggggcgatcggcattcgcgacgtt
tgggcggcaacggagtctgcgatggaaaatgcccgcagtgatgagactcgcgaccatatt
ttaacctggcaacaagagttagcctggcgggagttttatcaaacggtcatgtactttttc
ccggaactcgctcaaggtccttatcgagaaccatggaaccgctttccttggcacaatgat
gaacagaagtttgccgcttggtgtgaaggaaaaacaggatttccgattgtggatgccgcg
atgcgacaactcaatcaaacgggatggatgcacaatcgttgtcgtatgattgtcgccagt
tttctgacgaaggatttaatgattgattggcaatggggagagaagtattttatgcaacat
ctcattgatggggatttatcggcaaataatgggggatggcaatggagtgcatcgagtggt
atggaccccaaaccgttgcggattttcaacccggctagtcaagctaagaaatatgacccg
caagctgagtatatccgctactggctcccggagattcgctctttggagacgaaggattta
gtgacagggaatatttcgcctttagattgtgaggcttgtggttatcctcaggcgatcgtt
aatcataatgaacagcaacggctgtttaagcagatttataaggatttgaagagttaa
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