Phormidium sp. PBR-2020: JWS08_13440
Help
Entry
JWS08_13440 CDS
T07578
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00300
Lysine biosynthesis
phor00470
D-Amino acid metabolism
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
phor01120
Microbial metabolism in diverse environments
phor01230
Biosynthesis of amino acids
Module
phor_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JWS08_13440 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWS08_13440 (lysA)
Enzymes [BR:
phor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JWS08_13440 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UCJ14398
LinkDB
All DBs
Position
complement(3056566..3057969)
Genome browser
AA seq
467 aa
AA seq
DB search
MVSTPSLETPLSGRTFLETAIASTSPNQSLVPLTTRLGDNDALEIGGCDVPTLVRRFGSP
LYILDESTLRSACRQYRDAFARYYKGDALVLFASKAWSCLAVCALVASEGLGTDVVSGGE
LYTALRAGVAPDRIYLHGNNKSAQELNYAIESGITVVADNWQDLRLLVELNSDRPNPVRV
MLRFTPGIECHTHEYIQTGHIDSKFGFDPDSLDEVLQFVAEQPSLNCIGLHAHIGSQIFE
LQPHHDLPEVMVSWLQRAHAYNLPVTELNVGGGLGIRYTEADDPPSIEAWVKTICDRLSR
ACAEANLPLPRLLCEPGRSLIGTACVTAYSIGSCKTVPGLREYITVDGGMSDNPRPITYQ
SLYRAVIANRMNAPATETVTIAGKHCESGDVVIADAKLPKTEAGDTLVVMGTGAYNYSMS
SNYNRLPRPAAVLVCEGEANLILQRETYEDLLRQDRLPERLAPKQGS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggtctcgactccttctcttgaaacccctctatctggtcgtaccttcctggaaacggcg
atcgcctcaacctctcctaatcaaagtttagttcccctcaccactcgtctgggggataac
gatgccttggaaattgggggctgtgatgtgccgaccttggtgcgtcgctttgggtccccc
ctctatatcctcgatgaaagcaccctacgcagcgcctgtcgtcagtatcgcgatgccttt
gctcgctattataagggggacgctttggtgctgtttgcctcaaaagcctggagttgtttg
gcagtgtgcgccctggtggccagtgaaggcttagggacggatgtggtcagcgggggtgag
ttgtatactgccctgagagcgggagttgcccccgatcgcatctatctccatggcaataac
aaatcggcccaagaactcaactatgcgattgagtcaggaattacggtggtggccgataac
tggcaggatttacggctgttggtggagttaaatagcgatcgccccaatccggtgcgcgtg
atgttgcgcttcacccccggcattgaatgccatacccatgagtatattcaaacgggtcat
attgacagtaaatttggctttgacccagactctctcgatgaggtattgcaattcgttgct
gagcagccgagtctcaattgcattggcctccatgcccatatcggctcgcaaatttttgag
ttacaacctcaccatgatttacccgaggtcatggtatcttggctgcaacgggcccatgcg
tataatctaccagtgaccgagttaaatgtcggtgggggtttggggattcgctataccgag
gcggacgatcccccgagtattgaggcttgggtgaaaaccatctgcgatcgcctcagccgc
gcctgtgcggaagctaatctacccttaccgcgtctcctctgtgaaccggggcgatcgctg
attgggacggcttgcgtaactgcctacagcatcggctcttgtaaaacagttcccggattg
cgcgagtatatcaccgtcgatggtggaatgtccgacaatccccggccgattacctatcaa
tccctctatcgtgctgtgattgctaaccgcatgaacgcccccgcgacggaaactgtaacc
attgccgggaaacattgcgaatctggagatgtggtcattgccgatgccaaactcccgaaa
accgaagccggggatacgctcgtcgtcatgggaactggagcctacaattacagtatgtcg
tccaactataatcggcttccccgccccgctgcggtcttagtgtgtgagggagaagcgaac
ctgattttacagcgagaaacttacgaggatctgctgcgtcaagatcgcttaccggaacgc
ttagcccccaaacaaggctcctag
DBGET
integrated database retrieval system