Phormidium sp. PBR-2020: JWS08_14650
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Entry
JWS08_14650 CDS
T07578
Name
(GenBank) phytoene/squalene synthase family protein
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00100
Steroid biosynthesis
phor00909
Sesquiterpenoid and triterpenoid biosynthesis
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
JWS08_14650
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
JWS08_14650
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
phor01006
]
JWS08_14650
Enzymes [BR:
phor01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
JWS08_14650
Prenyltransferases [BR:
phor01006
]
Terpene biosynthesis
Squalene/phytoene synthase
JWS08_14650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
DUF7341
Motif
Other DBs
NCBI-ProteinID:
UCJ11038
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All DBs
Position
complement(3321800..3322609)
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AA seq
269 aa
AA seq
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MNWPNDALEVLKQTSRTFYIPIVQLPANLQEAVTSAYLCMRAIDEIEDHPHLDNATKARL
LRSLSLQLQTGTGENDQFSPDWGDSYDQLPEVTVRVSDWAKLAPDSIAPRIWDATAAMAD
RMAFWADRNWTVNTVTDLDSYTFSVAGAVGLLLSDLWAWYDNTQTSRMEAIGFGRGLQTV
NILRNHREDKARGVDFFPNDWTATQMQAYARHNLEFAERYTNALPKGPALDFCRIPLVLA
QGTLKTLALGKPKLSRDDVMQLIGQVSHG
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgaactggcccaacgatgccctagaggtgctgaaacagacgagtcgcaccttttatatt
cccattgtccagcttcctgcaaaccttcaggaagccgtgacctccgcctacctctgtatg
cgggccattgacgagattgaagaccatccccatctcgacaatgccaccaaagcccgacta
ctgcgatcgctgtccctgcaattgcaaacgggaacgggcgaaaacgaccaattcagcccc
gactggggagacagttacgaccaactcccggaagtcaccgtacgagtcagtgactgggct
aaactggcccccgacagcatcgccccccgcatttgggatgccaccgccgccatggccgat
cgcatggccttctgggctgatcgcaactggacggtcaacaccgtcaccgacctcgatagc
tataccttcagcgtcgcgggggctgtgggacttctcctatccgatctctgggcctggtat
gacaacacccaaaccagtcgcatggaggccatcggcttcggacgcggactacaaacggtg
aacattctccgcaaccatcgcgaagacaaagcccgaggggtggacttcttccccaacgat
tggacagcgacgcaaatgcaggcctatgcccgccataacctggaatttgccgaacgctac
accaacgccctgcccaaaggccccgccctggacttttgccggattcctttggtattagcc
caaggaaccctcaaaaccctggccctgggcaaacccaaactcagccgcgatgatgtcatg
cagctgattggacaggtgagtcatggataa
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