Phormidium sp. PBR-2020: JWS08_15480
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Entry
JWS08_15480 CDS
T07578
Name
(GenBank) translocation/assembly module TamB domain-containing protein
Organism
phor
Phormidium sp. PBR-2020
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
UCJ11177
LinkDB
All DBs
Position
complement(3523635..3529430)
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AA seq
1931 aa
AA seq
DB search
MVNPSPQPEPNSSSGQHRRLKRRLILGGTLLVVTVVGYRVSFNWLRSQLPGWVEAQVVPI
LNRPLELGPVQRLSLTGIELGGLYLPPSEGNPNSLQVEQIQVGYDVLALLRGELPIHVTL
REPRLIAQQAEDGTWVTLDLNLPEPTDEELPLEIPLNLILEGGSLELTPQGHSDPWELGF
EGRTELSQSFENAYYDLAVTLPQGTVHLRGNTRVNSLETRVNTRLQEVELGQFLALLPPE
LGDRLDLVSGRLNGNLNLEVPPLITPEGEFEIQIPQIQGPLSLDNLVVRVRELRQPLTAE
ADLRFQGDRLQLDGLTAATGTVGAKNFSPLLQGQGQLSQDSGYNLSFSTDSIAIERLSIL
LSDPLLTPIDTIGLIGDIQGQAQLLGDLNDPQLTVSVSNTTPLIVAQTIISQLRVNLSAN
LDRVVLNDFRLSPGVGGSVLARGNAEISQWTAPLLEQLPEGLLEDRPQRTPRANLNLDVR
VDLPSDALVAPYLDLPIPLRLGQLLAQIDLGGTLDNPQATLTWTTPDLFVPQLGAVSSQG
EASFANGRLRLQRADLIAAEGQITATGLADFLEQTWQADLLSTPLNLAPFLAVPAELSQF
TAQVSGRFDDLSPEGILRGIEGTADLGITLADGQAQVQGLLQGGEIRLEAIASGLSAQGL
NLALPLGVRLERGRAQVQTSLEGLLAAAMNRDFAGIAVQAEGALAVAEGTAQVRTQVRDG
QVDSNFNVANIALTPYLPNLPATVALMNAEGQGTLSLANILQVLEQGDLSQLDPQGTTQA
NLALNQGSGSLSAQVAGGQWQLRTETQLPVDDALVEELIGDRIVTSPRFPAILQASSHLS
GSLTPLLQLGTVPIPATLHQLTANLDGDLLRARGETVLTNLRQRPDLQMDLEIDANYDSD
RLPLTLLLADVAVGENLQSPSAVNVRGRVDFRGRFQGQNLLSNPFGVGNLNLAGAVQLND
FGVNEIQFEPRMRGTVFASTGDRLALDLRGEQPLGDRLAIALGACQEARCLAPYLPQEFE
IRKTDGEVVEFLARGERQGDRVQVGLDSFELSLLNVLPGEPFGIDDPISGQVTGGIVANL
FTLETQGQVAVANPALGYLRGEAIAAEFGYDGQQAQIRNGRLQFQETRLVLNGGTELDLL
AILQGRLPLNAWQEAPVWGRLTVDEAEVGDLLTTVAWYELDDLLRRGIASPSLDPQDLTV
TGVGIPQRSLPEQLALFNRIRQQVRQRISQPDDPQPPQVVEIEGTYTAQVDLGGTLGNPN
LIAELTAENWRWYPQPQPPAAFRAAIPTPRPSLRLDALNLRARLEDQVLTVEEASLLAEG
GQASLVGTVSPERLEGGVTVRDFPVSLVQRFVDVPVDVAGEVNLQGTFGGSLQQPRLVGE
VAIANPVLNNRPLDPFLGNFSYDNQQFEFATLAPDWSRLQVSVPFPFTDLPPEGAIARAQ
VALDTPAFELIEAISEGEVVWLGGEGLVELSASVDLLALTSGEIQRILNSVVAQGAIALD
QSRVAAAALPEAETQVDGVIRFNQEAIVVDELLAQVAEGEFRLGGVLPLLTPDPELERPL
TLTVDQGAIALDGLYNGQLDGRITLTGTALTPVISGGIEVSRGRVLVPTRELTGGELATA
INPTVSPQNPSPLITPVLDRFRIVLGERLNIVNPIPSFNVRVRGDLLVSGVVDGNLENLR
PQGVISVERGQLDLLSNLFFITPGRPQTVEFIAEEGLLNPRLDLQMSTLVSEERRNPIAD
RDRDSNEVPDTTILPLRQSRQLLVNVTIDAMAQDLLNAVLAESPELVQVEGFQRNDALLE
TVQLSSVPSRSENELVSLLGGQVLTTIDEIAGLRGTELFEYALLRFVLEPQLTGLLVDVD
RVANQAGDAIGLDRLSVFPIGQVEAIYELNERSLLGLTYDYGLSGFLLQGGQTDGETPGF
SSIELRYELRF
NT seq
5796 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatccatctcctcagcccgaacccaattcttcctcagggcaacaccgtcgcctc
aaacgacggttaattcttggaggaacgctcctggttgtgaccgtggtgggctatcgtgtc
tctttcaactggctgcgatcgcaacttccgggctgggtcgaggcccaagtggtccccatt
ctcaatcgtccgctggaactcgggccggtgcaacggctatcgctgacgggcatcgaactg
gggggactgtatctaccgccgagtgagggaaatcccaattccttgcaggttgagcagatt
caggtgggctatgatgtgctggccctcctccggggagagttgcccatccacgtcactctc
agggaaccgaggctgatcgcccaacaagcggaggatggcacctgggtgacgttggatctc
aatcttcctgaaccgacagatgaggagttgcccctagagattcccctcaatctgatttta
gaggggggcagccttgaactcaccccccagggccattctgacccttgggaactggggttt
gaggggcggacggaactgagtcaatcctttgagaatgcctattatgacctggcggtgacc
ttaccccagggaaccgttcacctgcggggcaatactcgcgtcaatagcctggaaacccga
gtcaatacccggttgcaggaggtggaattagggcagtttttagccctgttgcccccggaa
ttgggcgatcgcctggatctcgtcagtggtcgtctcaacggaaatctcaatctggaagtt
ccgcccctcatcacccctgagggagagttcgagattcagattccccagattcaaggaccc
ctcagcctcgataacttggtggttcgggttcgagaactacgtcaacccctcaccgctgag
gcagaccttcgctttcagggcgatcgcctacaactcgatggcctcaccgccgccaccgga
acagtaggggcgaaaaatttttcgcccctacttcagggacaaggacaactcagccaggac
tccggctataatcttagcttcagcactgattctatagccatagaacgcctctcaattcta
ctgagtgaccccctcctcacgcccatagatacaattggtttaataggggatattcaaggg
caggcgcaactcctcggagacctcaacgaccctcaattgaccgtcagtgtcagcaatacc
acaccgctgattgtggcccaaacgatcatctcccaactgcgggttaacctctcggccaac
ctcgatcgcgtggttctcaacgactttcgtctcagtccgggcgtggggggaagcgtcctg
gcccggggcaatgccgagatttctcaatggacggctcccctgctagagcaacttcctgag
ggtcttcttgaggatcgcccccaacggactccgagggccaacctcaacttggatgtccga
gtggatctccccagtgatgccctcgttgccccctatctggacttacccatccccctgcgt
ttggggcaactgctggctcagattgacctggggggaaccctagacaatcctcaggccact
ctaacctggacgacccccgacctcttcgttccccaattgggagctgtcagcagtcaggga
gaggcgagctttgccaatggccgtctccggttgcagagagccgacctcattgctgcggag
ggacagatcaccgcaacgggactggcggacttcctagagcaaacctggcaggcggatctg
ctgtccacgccgctgaacctcgcccccttcttggcagtcccggcggaactgagccagttc
acggcccaagtctcggggcgatttgatgatctctcccccgagggaatcctccgagggatt
gagggaaccgctgacctgggaattactctggctgatggacaagctcaagtgcaaggacta
ctgcaagggggagagattcgccttgaggcgatcgcctcgggactctccgcccagggtctg
aatttggcgttacccctgggggtgaggttggagaggggtcgggcccaggtgcaaacctcc
ctggaaggattgctggccgccgccatgaaccgggactttgcaggaattgcggtgcaggcc
gagggagccttagccgtcgccgagggaacggcccaggtcaggactcaagtccgagatgga
caggttgacagcaatttcaatgtcgccaatatcgccttaactccctatttgcccaatctt
ccggcaacggtggctctcatgaatgccgagggacaggggactctgtctctggccaatatc
cttcaagtcttagaacagggagacctcagccaactcgacccccaagggactacccaagcg
aacctggctctcaatcaggggtcaggaagcctctcggctcaagtggcggggggacaatgg
caactgaggactgagactcagttaccggtggatgatgccttggttgaggagttgattggc
gatcgcatcgtcaccagtccccgcttcccggcgatattacaggccagcagccatctctcg
gggtccctaacgcctctgttgcaattggggacggtgccaattccggcgaccctacatcag
ttgacggctaatctcgatggggatttattgcgggcccgaggggaaacggtgttaaccaat
cttcggcaacgcccggatttacaaatggatttagagattgatgctaattatgattcagac
cgacttccgttgaccttattattggcggatgtggctgtgggggaaaatttgcagagtccc
agtgccgtcaatgtccggggacgggtggattttcggggacgctttcagggccagaatttg
ctgtctaatccctttggggtgggtaatttgaatctggcgggggcggttcaattaaatgat
tttggggtgaatgagattcagtttgagcctcggatgcgggggacggtttttgccagtacg
ggcgatcgcctggctctggatttgcggggagaacagcctctgggcgatcgcctggccatt
gccttaggggcctgtcaggaggctcgctgtttggctccctatttgccccaagagttcgag
attcgtaaaaccgatggggaggtggttgagtttttggcccgaggtgagcgtcagggcgat
cgcgttcaggtggggttagactcgtttgagttgagtctcttaaatgtgcttccgggagaa
ccctttggcattgatgaccccattagcggtcaggtgacggggggaattgtggccaatctc
tttaccctggagactcagggccaggtggcggtggctaatccggcgttgggctatcttcgg
ggggaggcgatcgccgctgagtttggctacgacggacaacaggcccagattcgcaatgga
aggctgcaattccaagagacgcgtctggttctcaatggggggacggaactggatctgttg
gcaattttgcagggccgtctccccctgaacgcttggcaagaggccccagtctggggacgg
ctgacggtggatgaggcggaggtgggcgatctcctgacaacggtggcttggtatgaactc
gatgacctgttacgtcgggggattgctagccctagtttagacccgcaagacctgacggtg
acgggggtggggattcctcagcgatcgctccccgaacaattggctctgtttaaccgcatt
cgccaacaggtgagacaacggatatcccaaccggatgacccccaaccgcctcaagtggtg
gagattgagggaacttataccgctcaagtggatttagggggaacgctgggaaatcccaat
ctcatcgcggaactgacggcggagaattggcgttggtatcctcaacctcagccccccgct
gcctttcgagccgcgattcctactccccggccctcgctgcggttggatgctctcaatctg
cgggcccggcttgaggatcaggtgttgacggtggaggaggcgagtctgttggcggagggg
ggacaggcttcgttggtggggacggtgtctcccgagaggctagagggtggggtgacggtg
agggatttcccggtgagtctcgtgcagcggtttgtggacgtaccggtggatgtggcgggg
gaggtgaatcttcagggaacctttggcggcagtctgcaacagccgaggttggtgggggag
gtggcgatcgccaacccggttctcaacaatcgccccctcgacccgtttttgggcaatttt
agctatgacaatcagcagtttgagtttgccactctggccccggattggagtcgccttcag
gtgagtgttccctttcccttcacggatttaccccccgagggggcgatcgcccgggcccag
gtggcgttggatactccggcgtttgagttgattgaggccatcagcgagggtgaggtggtt
tggctgggtggggagggactggtggaactctcggcgagtgtggatctgttggcgttaacc
tctggggagattcagcggattcttaattctgtggtggctcagggggcgatcgctctggat
cagtctcgggtggcggcggcggctctcccggaggcggaaactcaggtggatggggtgatt
cgctttaatcaggaggcgattgtcgtcgatgagttgctggcccaggtggcggagggtgag
tttcgtctcgggggggtgttacctctgttaactcctgatccagagctagagcggcccctt
acgttaacggtcgatcagggggcgatcgcccttgatggtctttataacgggcagttagat
ggccggattacgctgacgggaaccgctctcactcctgtcatttctggaggaattgaggtc
tctcggggacgggtgttagtgccgactcgggagttgacgggaggggaacttgccacagcc
attaacccaactgtttccccccagaacccgtcaccgctcattacacccgtcttggatcgc
tttcgtattgtccttggggaacgcctcaatattgtcaacccgattcccagttttaatgta
cgggtgaggggggatctattagtgagtggggtggtggatggcaatttggagaatttacgt
cctcagggggttatatcggtggaacggggacagttggatttgctgagtaatctctttttt
attaccccgggccgtccgcaaacggtggagtttattgcggaggagggcctgttgaatcca
cggttagatcttcagatgtccactttggtctccgaggaacgccgcaacccaattgccgat
cgcgatcgtgatagtaatgaagtccccgatacgacaattttgcccctacgccagtctcgt
caactgttggtgaatgtcaccattgacgctatggctcaagatctcctgaatgcggtgttg
gcggagtcgcctgagttggttcaggtggagggatttcaacgcaatgatgccttgttggaa
acggtgcagttgagtagtgttcctagtcgcagtgagaatgagttggtctcgttgctgggg
ggacaggtgctgacgacgattgatgagattgccggattgcgaggaacggagctgtttgaa
tatgccttgcttcgcttcgtcttggaaccccagttaacgggactcttggtggatgttgac
cgagtggctaatcaggcgggagatgcgatcggcttggatcgcttgagtgtgtttccgatt
ggtcaagttgaggcgatttatgaactcaatgagcgatcgctgttgggattgacgtatgac
tatggtctcagtggctttttactccaagggggacagacggatggagagacacctgggttt
agttctattgaattacgctatgagttacggttttaa
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