Phormidium sp. PBR-2020: JWS08_15505
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Entry
JWS08_15505 CDS
T07578
Name
(GenBank) LysR family transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
phor
Phormidium sp. PBR-2020
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phor03000
]
JWS08_15505
Transcription factors [BR:
phor03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JWS08_15505
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PilI
MarR_2
HTH_30
PBP_like
Motif
Other DBs
NCBI-ProteinID:
UCJ11181
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Position
3534559..3535473
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AA seq
304 aa
AA seq
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MIQATFHQLRVFETVARHGSFTRAAEELSITQPTVSSQIKHLTQVIGMPLFEQIGRQLYL
TEVGEELLNTCQTIFERLDNFEMMVADLQGTKRGKLRLGVVTTAKYFVPRLLGSFCQQHP
DVDIALHVSNHQKLVQRMLNNQDDFYILSHPPEDIDLVVTPFLDNPLVVVASHEHPLARE
ESIPIKKLRGEAFIMREPGSGTRRAVQQVFDRHKVTVNVRMELGSNEAIKQSVIGGLGIS
VLSLHCLRPDYQQGELVILKVKEFPIPCRWYMVHRSGKQLSVLTEAFLEHLLAESQSLAV
ETGC
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgatccaagcgacgttccaccaattacgtgtctttgaaaccgtggcacgtcacgggagt
tttacccgggcggcggaagaactctcaatcactcaaccgacggtatcgagtcagattaag
catttaacccaagtgattgggatgccgctgtttgagcaaatcggccgacaactctactta
acggaggtgggggaagaactcctcaacacctgtcagacaatttttgaacgcttggacaac
ttcgagatgatggtggcggatctccagggaacgaagcggggaaaactgcgcctgggggtg
gtgacgacggcgaaatactttgtcccgcgtctgttggggtctttctgtcagcagcatcct
gatgtggatattgccttacacgtgagcaatcaccaaaagttggtgcaacggatgctcaat
aatcaggatgatttctatattctgagtcatcccccagaggacattgacttagtagtcacg
ccatttttagacaatcctctggtggtggtagcctcccatgagcatcccctggctcgggag
gagagtatacccattaaaaaactgcggggagaggcgtttatcatgcgagaaccgggttcg
gggacgcggcgagcggtgcaacaggtgtttgaccgccataaggtgacggtcaacgtgcgg
atggagttggggagtaatgaggcgattaaacagtcggtgattggcgggttggggatttcg
gtgttatccctgcactgtttacggccggattatcaacagggggagttggtaattttgaag
gtgaaagagtttccgattccctgtcgttggtatatggtgcatcgctcggggaaacagctt
tcggtgctgacggaggcgtttctggagcatctattggcggaaagtcaatccctcgccgtg
gagaccgggtgctaa
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