Phormidium sp. PBR-2020: JWS08_15565
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Entry
JWS08_15565 CDS
T07578
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JWS08_15565 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phor03019
]
JWS08_15565 (groL)
03110 Chaperones and folding catalysts [BR:
phor03110
]
JWS08_15565 (groL)
03029 Mitochondrial biogenesis [BR:
phor03029
]
JWS08_15565 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phor04147
]
JWS08_15565 (groL)
Enzymes [BR:
phor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
JWS08_15565 (groL)
Messenger RNA biogenesis [BR:
phor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
JWS08_15565 (groL)
Chaperones and folding catalysts [BR:
phor03110
]
Heat shock proteins
HSP60 / Chaperonin
JWS08_15565 (groL)
Mitochondrial biogenesis [BR:
phor03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
JWS08_15565 (groL)
Exosome [BR:
phor04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
JWS08_15565 (groL)
Exosomal proteins of other body fluids (saliva and urine)
JWS08_15565 (groL)
Exosomal proteins of breast cancer cells
JWS08_15565 (groL)
Exosomal proteins of colorectal cancer cells
JWS08_15565 (groL)
Exosomal proteins of bladder cancer cells
JWS08_15565 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
UCJ11190
LinkDB
All DBs
Position
complement(3547719..3549356)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKRIIYNENARRALERGMDILAESVAVTLGPKGRNVVLEKKFGAPQIVNDGITIAKEIE
LEDNVENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKEGLRNVAAGSNAIALKRGID
RATAHLVEKIAAHARPVEDSTAIAQVGTISAGNDEEVGQMIANAMDKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKISLVQDLVPILEQVA
RSGKPLLIISEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLDDIAVLTGGQVI
TEDAGLKLETAKLEMLGSARRITITKDNTTIVAEGNEAEVKARCEQIRRQMEESDSSYDK
EKLQERLAKLSGGVAVIKVGAATETEMKDRKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APGLEEWATSNLENEELTGALIVARALTAPLKRIAENAGQNGAVIAERVKEKDFNVGYNA
ANGEFCDMFEAGIVDPAKVTRSATQNAASIAGMVLTTECIIVDKPEPKEGAGAGAGAGMG
GDFDY
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgcatcatttataacgaaaacgcccgccgcgctttagaacgaggcatggat
attctggctgaatccgttgccgttaccctcggccctaaaggtcgcaacgtggttcttgag
aaaaaatttggcgcacctcaaatcgtcaatgatgggatcaccatcgcgaaagaaatcgaa
ctcgaagacaacgttgagaacaccggcgttgccctaattcgccaagcggcatctaaaacc
aacgatgctgccggagacggaaccaccactgcaacggttctggctcacgccatggtgaaa
gaaggcctacgcaacgtcgctgctggatcgaatgcgatcgccctcaaacggggtattgac
cgcgccaccgcgcatctcgttgagaaaattgccgctcatgcccgtcccgtggaagattcc
acggcgatcgcccaagtgggaaccatctccgccggaaacgacgaagaagttggccaaatg
attgccaacgccatggataaggtgggtaaagaaggtgtcatttccctcgaagaagggaaa
tccatgaccaccgaactagaaatcaccgaagggatgcgctttgacaaaggctacatctcc
ccctacttcgccaccgacaccgagcggatggaagccgtgttggatgagccttacatcctc
ctgactgacaagaaaatcagcttggttcaagacttagttcctatcctcgaacaagtcgct
cgttcgggcaaacctctcctgattatctccgaagatatcgagaaagaagccctggcgacc
ctagtggtgaaccgtttacgcggtgtgctgaatgtggcggctgtgaaggctcctggattt
ggcgatcgtcgtaaagccatgctcgacgatatcgcggttctcaccggcggccaagtcatc
accgaagatgctggactgaaactcgaaaccgccaaactggagatgctcggctcggctcgt
cgcatcaccatcaccaaagacaacaccaccattgtcgccgaaggcaacgaagctgaagtt
aaagctcgttgcgaacaaatccgtcgtcaaatggaagaaagcgattcttcctacgacaaa
gagaaactgcaagagcgtttggcgaaactctccggcggtgttgcggtcatcaaagttggt
gcagccaccgaaacggaaatgaaagaccgtaagctgcgcctcgaagatgccatcaacgcc
actaaagctgccgttgaagaagggattgtccccggtggtggaacgactctggctcacctc
gctcctggcttggaagagtgggcaacgagcaacctagagaacgaagaactcaccggtgcg
ctgattgtggctcgtgccttgacggctcccctaaaacgcattgctgagaacgccggccaa
aacggtgcagtcattgctgaacgggtgaaggaaaaagacttcaacgtcggctacaacgct
gctaacggcgagttctgcgatatgttcgaagctgggattgttgaccccgcgaaagtgacc
cgttctgcgacccagaatgcggcctccatcgccggtatggtcttgaccaccgagtgcatc
atcgttgacaaacctgaacccaaagaaggtgctggcgctggcgctggtgctggtatgggt
ggcgacttcgactactaa
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