Phormidium sp. PBR-2020: JWS08_18100
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Entry
JWS08_18100 CDS
T07578
Name
(GenBank) AAA family ATPase
Organism
phor
Phormidium sp. PBR-2020
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
Pkinase
HATPase_c
PK_Tyr_Ser-Thr
GAF
Kinase-like
GAF_2
HisKA
Kdo
ABC1
Pkinase_fungal
AAA_22
nSTAND1
Sigma54_activat
DUF2225
CCDC144C
DUF2884
Motif
Other DBs
NCBI-ProteinID:
UCJ11636
LinkDB
All DBs
Position
complement(4159624..4165083)
Genome browser
AA seq
1819 aa
AA seq
DB search
MSPAFPHLPGYTLLKQLYLGSRTVTYRGIQQRDRRPVVIKLLRTERPSFADLMQFRNQYA
IAKSLDSPGILQPLSLDPAGHRYALIMEDWGGVSLNNYSQDHPLELAQTLAIAIQVAQIL
QDIHQQRIIHKDIKPANLLIHPQTQQIKLIDFSIASQLDKEVQELQTPNRLEGSLAYLAP
EQTGRMNRGIDYRSDYYAFGVTLYQLLSGCLPFNADDPLELIHCHIAKMPIPLNQVNPSL
PEPLAALVAKLMAKNAEDRYQSALGIKYDLQSCLTQWQQQGAIAPLELAQRDVSDRFLIP
EKLYGRQAQVQTLLNAFDRVSQGASEMMLVAGFSGIGKTAVVREVHKPILEKRGYFIQGK
FDQFKRNIPLQALIQAVEDLIEQLLCEPDERLNRWSAAISEVLGDNGQVLIEVIPELEQI
MGPQPPAPQLSGTAAQNRFNRLFQQFIECFAQPEHPLVIFLDDLQWADSASLQLLKLLIK
GQSSLLLLGAYRDNEVSAGHPLLLALDDLQQGSLTINTIHLGPLQVEDINQLIADTLHCS
PELAQPLTEFTARQTQGNPFFITQFLKTLHRDGHIRLNPQKGHWDCDIHQITTLSLTNDV
VEFLAQQLQHLAPESQEVLKLAACIGNEFDLASLSIVSQHSPREVASRLWPAVQEGLILP
TSALYKVFQELDSGETNPDINPSYRFLHDRVQQAAYFLIPDDDKPATHWQIGQLLLQRCD
EQEQADKLLEIVNQLNAGSVLIRTPAQQQQVAELNLEAGRRALAAAAHTTAATYFQTGIR
HLPDSPWQRLYPLTLSLYHHAVEVAYLNGEFSAMEQLAQEVFGQAQCFLDQIPIYDSKIQ
AYIAQNRLPEALTLAKFVLQELGVHLPDSPTPEETRLALEQVETQLAGRPVSELLDLPPM
QDSEKLAALRLLNTLVSITFVAYPNLLPLVICKQVSLSLNYGNSSASAFSYAAYGLILAS
LYDVYKGFQFGSLAMNLQEKLQAKSFKSKILNMVYSMIVPWQQPLRDCLPALKEGYQAGL
ETGDVEYAAYCILHHNEYQYFSGVNLVYLAEKLGQYGQALSDINQYNTRTYQDIYYQAVL
NLIEAPDHPTELVGAAYDERQSLPLHYQVADRYAIYQVYLQKLILSYLLLEPAGKWADLA
KPYIDGVPGLYFGSVFYFYDSLVQLAAYRERTPTEQAEILGRVQENQAKLQRWAESAPVN
FLHKVQLVEAERYRVLGDTTAAIEAYDGAIAAAKAAEYPQEEALACERAALFYRNWGKEK
IAQVYLTDAYYGYVYWGAKTKVLDLERRYPRLLAAILNPQRPPLSMTETVLGNQSISISQ
SSGSQTASSDSSRFCAGLDLASVLKASQSLSGEMNLNSLLAKLLEIVLKTAGADKALLLM
PQGSDWWIEAMATLEVAPRVESLPLSEYTEIAATLVHTVRRSLKPTVIANAVVHPRLGGD
RYVRERQVKSLMGLPILRQGSLMGVLYLENQQTIGAFTGGANGGGDRLEMLEILASQGAI
SIQNARLYQQVAEYSHRLEVEVERKTQALRQKALDLEATLTNLQQTQAQLIQSEKMSALG
QLVGGIAHEINNPINFIYGNLSYAEQYIKDLLRLVACYQQEFPQENGVVQEVMEQIEFDF
IGQDYEDLFRSMRSGSDRIRTIILNLRNFSRLDESDVKTVDLHEGLESTLMVLQQRLEGG
SKTAPIVVVKEYGTLPKLSCYASQINQVFLGLLSNAIDALQDFRKTGQKTGDRPTIRIQT
RWVESGFIEVTISDNGNGIPEGIKAHIFEPFFTTKAVGQGTGLGLSVSYAIISRHGGSIT
CESQVGVGTDLTIRLPLSR
NT seq
5460 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgcgttccctcaccttcccggctacaccctcctcaaacagttgtacctcggt
tcccgaaccgtcacctatcggggcatccagcagcgagatcggcggcctgtcgtcatcaaa
ctcttgcgaaccgaacgccccagctttgccgacttaatgcagtttcgcaaccaatatgcg
atcgccaaatccctagatagtcccggtatccttcagcccctaagtttagaccccgccggc
catcgctacgccctgatcatggaggactgggggggagtctccttaaacaactatagccaa
gaccatcccttagagctggcccaaaccctggcgatcgccatccaggtagcccaaattctc
caagacatccaccaacagcggattatccataaagacatcaaacccgccaacctcctcatc
cacccccagactcagcaaatcaaactcatcgacttcagcatcgcctcccaactcgacaaa
gaagtccaagaactgcaaacccccaaccgcctcgaaggaagcctcgcctatctcgccccc
gaacaaaccgggcgcatgaatcgcggtatcgactatcgcagtgactattacgccttcggt
gtcaccctctaccaactcctcagcggctgtctccccttcaacgccgacgatcccctggag
ttgatccactgtcatatcgccaagatgcccatccccctgaatcaggtgaatcccagcctt
cctgaacccctggccgcccttgtcgccaaacttatggcaaaaaacgccgaagaccgctat
cagagcgccctgggcatcaaatatgacctgcaatcctgtttaacccaatggcagcaacag
ggggcgatcgcccccctagaactggctcaacgggatgtgagcgatcgcttcctcatcccc
gaaaaactctatggccgccaggcccaagtgcaaaccctcctcaacgcctttgatcgcgtc
agccaaggcgcatccgaaatgatgctcgtggccggcttctccggtatcggcaaaaccgcc
gtcgtgcgcgaagtccacaaacccatcctggaaaaacggggctacttcatccagggcaaa
tttgaccaatttaagcgcaacatccccttacaagccctcatccaagccgttgaagacctg
attgaacaactcctgtgtgaaccggatgaacgattaaaccgttggagcgccgccatttca
gaggttctcggggacaacggacaagttctcattgaggtaattcccgaacttgaacagatt
atgggtccccaaccccccgccccgcaactctcaggaaccgccgcgcaaaatcgctttaac
cgcctctttcagcagtttatcgaatgctttgcccaacccgaacatcccctcgtcatcttc
ctcgatgacctgcaatgggccgattccgcctccctgcaactgctgaaattactcatcaag
ggacaaagttccctactcctactcggggcctatcgagacaacgaagtctcagccggccat
cctctgctcctggccttagatgacctacaacagggatcgctaaccatcaacactatccat
ctggggccgcttcaagtcgaggacatcaaccaacttatcgccgataccctccactgttcc
ccggaattagcccagcctctgaccgagtttaccgcccgtcaaacccaaggaaatcccttt
ttcatcacccagtttctcaaaaccctgcatcgggatggccatatccgcttgaacccccaa
aagggtcattgggactgtgacatccaccaaattaccaccctctccctcaccaacgatgtg
gtggaatttctagcccagcaattgcaacacctggctcccgaaagccaagaggttctcaaa
ttagccgcctgtatcgggaacgaatttgatttagccagcctcagtatcgtctcccagcac
agtccccgcgaggtggcgagtcggctctggcccgccgtacaagaggggctaattttgccc
accagcgccctgtataaagtctttcaggaactcgactcgggcgagacgaacccagatatt
aaccctagctatcgctttctgcacgatcgcgtccaacaagcggcctatttcctcatcccc
gacgacgacaaacccgccacccattggcagattggacaactgctcctacaacgctgtgat
gagcaagaacaagccgataaactcttggagattgtcaaccaactcaacgccggaagcgtc
ctcatccgtaccccggcccaacagcaacaagtggcagaactgaacctagaggcgggacgc
agagccttggccgccgccgcccataccaccgccgccacctacttccaaactggaattcgc
catctcccagactccccttggcaacgactctatcctctcaccctgagcctctatcaccat
gccgttgaggtagcctatctcaatggggagttctcagccatggaacagctcgctcaggag
gtgttcggccaggctcaatgtttcctggatcaaattcccatctatgacagcaaaatccaa
gcctacatcgctcaaaaccgcttacctgaagcgttaaccttagccaaatttgttttgcag
gaattgggggttcatttacccgacagccccacccccgaggagacccgcttggctctagag
caggttgagacacaactcgccgggcgtccggtgtcggagcttctcgatttgcccccaatg
caggactcggaaaaattggcggctctgcgacttttaaatactttagtttcgattacattt
gtagcatatcccaatcttttacccctggttatttgcaagcaggtgagtttatctctcaac
tatggaaattcatcggcttctgcattctcttatgctgcttatggtttgattcttgcgagt
ttgtacgatgtttataaaggctttcagtttggaagtttggcgatgaacttacaggaaaaa
ctccaggcaaaaagcttcaaatccaaaatcttaaacatggtttatagcatgattgtaccc
tggcaacagcccttaagagactgtctcccggcgttgaaagagggatatcaagcagggcta
gagacgggggatgttgaatatgcagcatattgcattttacatcacaatgaatatcagtat
ttttctggtgtaaatttagtttatttggcagaaaaattaggtcaatatggccaggcattg
tcagatatcaatcaatacaacactcgaacctatcaagatatttattatcaggcagttttg
aacttaattgaagcaccggatcatcctacggaattagtgggagcggcctatgatgaacgg
cagtcgttaccgctacattatcaagtggccgatcgctatgcgatttatcaggtgtatctc
cagaaactgattttaagctatctgttgctggagccagcagggaaatgggcagatttagca
aagccttatattgacggggttcctgggctttattttgggtctgtattttatttctatgac
tcgttggtgcaattagcggcttatcgtgagcgcactccaacagaacaagcggagatttta
gggagagttcaggagaatcaggcaaaattgcaacgctgggcggagtcggccccggtgaat
tttctgcataaggtgcagttagtggaagcggaacggtatcgggtattgggagacaccacg
gcggcgatcgaggcctatgatggggcgatcgccgccgctaaggccgccgaatatccccag
gaggaagccctggcttgtgaacgggccgccttgttttatcggaattggggcaaggagaaa
atcgcccaggtgtatctgacggatgcctattatggctatgtctattggggggcgaagacg
aaagtgctggacttggaacgccgctatcctcgcttgttggcggcgattctcaatcctcag
cggccgccattgtcgatgacggagacggtgttagggaatcagtcgattagcatcagtcaa
agcagcggcagtcaaaccgccagttcagatagtagccgtttctgcgccggtttggattta
gctagcgtgttgaaggcctcccaaagcctttcgggtgagatgaacctcaactcactgctg
gcgaagctgctagagattgttctcaagacggctggggcggataaggcgttactcttgatg
cctcaggggagtgactggtggattgaggccatggcgacgttggaggtagcccctcgggta
gagtcgcttcccctctcggagtatacggagattgccgcaaccctggttcatacggtgcgt
cggagtctcaaaccgacggtgattgccaatgctgtcgtgcatccgcgtttggggggcgat
cgctatgtcagggaacggcaagttaagagtttgatggggcttccgattctgcgacagggc
agcctgatgggggtactgtatttggagaatcagcagacgattggggcgtttacgggcgga
gcgaatggcggaggggatcgcctggaaatgttagagatcttagccagtcaaggggccatc
tccattcaaaatgcccgtctttatcagcaagtggccgagtattcccatcgcttagaagtg
gaagtggagcgcaaaacccaggctctgcgtcaaaaagctctggatttggaagcaacactc
accaatttacaacaaacccaagcccaattgattcaaagtgaaaaaatgtcagccttgggt
caattggtggggggaattgcccatgaaatcaataatcccatcaattttatttatggcaat
ttaagctatgctgagcaatatattaaggatttattgcgtttggtggcctgttatcaacag
gaatttccccaagagaatggggtggtgcaagaggtgatggagcagattgagtttgatttt
attgggcaagattatgaggatttatttaggtcgatgcgctcaggcagcgatcgcattaga
acgattatcctcaatctgcgtaatttttcccgcttggatgagtcggatgtgaaaacggtg
gacttacatgaaggactcgaaagcaccttgatggtgttacaacaacggttagaaggaggg
tctaaaacggctcccattgtggtagtgaaggagtatggaactcttcctaaattatcctgt
tatgctagtcaaatcaatcaagtgtttttaggtctgttaagtaatgccattgatgcctta
caggattttcggaaaactggacaaaaaaccggcgatcgccccacaattcgcattcaaact
cggtgggttgagtcggggtttattgaggtgacaatttccgataatgggaatggcattccg
gaggggattaaagcgcatatttttgagccattttttaccacgaaagctgtgggacagggg
acgggattagggctatcggtgagttatgcgattatctcccgtcatggcggttcgattacc
tgtgagtctcaggtgggagtgggaacggatctgacgattcggctgccgctgtcacggtga
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integrated database retrieval system
