Phormidium sp. PBR-2020: JWS08_18130
Help
Entry
JWS08_18130 CDS
T07578
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS08_18130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
phor02000
]
JWS08_18130
Transporters [BR:
phor02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JWS08_18130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_29
AAA_5
AAA_13
PRK
nSTAND1
RsgA_GTPase
AAA_33
NACHT
NB-ARC
SMC_N
AAA
Adeno_IVa2
NPHP3_N
MobB
Viral_helicase1
TsaE
Motif
Other DBs
NCBI-ProteinID:
UCJ14492
LinkDB
All DBs
Position
4174679..4176322
Genome browser
AA seq
547 aa
AA seq
DB search
MTLLHIDHLRIAYPQTDPNDPLTWAVDDVSFQLAPRDRLGVVGESGCGKSTLGRAFMGLL
PQGSHIEGDIRFQGQSVLSRTPQQLRQFRGEEIALIFQDPMTRLNPLMTIGDHCIETLRA
HRPKLKFKDAKTQALETLNAVKIPGNRWSQYPHEFSGGMRQRVAIALALLLEPKLIIADE
PTTSLDVTVSAEILDELMGLCQDNDLALMLISHDIALVGEYCDRIAIMTEGKIVETGNTE
QILQSPQHPYSQSLLNAVRELQEVQPPPPPDPTSSISPLLQVENLQQHYSLEQNIIERLF
GKDKPETIKAVDNVNLSLYPGEILGLVGESGCGKSTLSRTILQLVKPTAGRVSFLGQDLG
QLSPETLRQQRRQMQMIFQDPHACLNPMMTVGDSIADPLIIHGLAKGKAAQQQVYNLLER
VGLTPPETYARRYPRELSGGQQQRVAIARALITHPKLIVCDEPVSMLDANVQAQVLSLMK
DLKDEFDLTYLFITHDLWVARFLCDRIAVMNQGQIVELAPTEDLFRNPQHPYTQTLLNAA
LSVKSSA
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
ttgaccctactccacattgaccacttgcggatagcctatccccaaaccgaccccaacgac
cctctcacctgggccgttgacgatgtctccttccaactcgccccccgcgatcgcctggga
gtggtgggcgagtcgggctgtgggaaatccaccttaggacgggcctttatgggacttcta
ccccaaggaagtcatatcgaaggggatatccgctttcagggccagtccgttctctcgcgc
acccctcagcagttgcggcaatttcggggggaagagatcgccttgatcttccaagatccc
atgacgcgcctcaatcccctcatgaccatcggggatcactgcatcgaaaccctgcgggcc
catcgtcctaagttgaagtttaaagatgccaaaacccaggccttagaaaccctaaacgcc
gtcaaaatccccggaaatcgctggagtcaatatccccatgaatttagtggcggaatgcgt
cagcgggtggcgatcgccctggccctactcctagaacccaaactcattatcgccgacgaa
cccaccaccagcctcgatgtcaccgtctcggcggagattctcgacgaactcatgggcctg
tgtcaagacaacgacttggccctgatgctgatttcccatgacatcgccttagtgggggaa
tactgcgatcgcattgccattatgaccgagggcaaaatcgtcgaaaccggcaacaccgag
caaattctccaatccccccaacatccctacagtcaatccctcctcaacgccgtccgcgaa
ctgcaagaggtgcaaccccctccccctcccgatcccacctcctcaatctcccctctcttg
caagtcgagaacctgcaacagcattacagcctagagcaaaacatcatcgaacggctgttc
gggaaagacaagccagaaaccatcaaagctgtcgacaacgtcaacttaagcctctatccc
ggcgaaattctcggattagtgggagaatccggctgtgggaaatccaccctctcccgaacc
atcctgcaactggtaaaacctaccgccgggcgagtgtcctttctcgggcaagatttagga
caactctctcccgagacgctacgccaacaacggcgacagatgcagatgattttccaagat
ccccacgcctgtctcaaccccatgatgacggtgggagatagcatcgccgatcccctgatt
attcatggactcgccaaaggaaaagccgcccagcagcaagtttacaatctcttggaacgg
gtgggactcaccccccccgaaacttatgcccgccgctatcctcgcgaactctctggcgga
caacagcaacgggtggcgatcgcccgggccctcattactcatcccaagttaatcgtctgt
gacgagccggtgagtatgctagatgccaatgttcaggcccaggtgttgagtttaatgaaa
gacctcaaagacgaatttgacctcacctacttatttattacccatgacttgtgggtggct
cgctttttgtgcgatcgcatcgccgtcatgaaccaagggcaaatcgtagaacttgccccc
accgaagacctatttcggaatccccaacatccctatactcaaaccctcctcaacgccgcc
ttaagcgttaaatcctctgcctaa
DBGET
integrated database retrieval system
