Phormidium sp. PBR-2020: JWS08_18165
Help
Entry
JWS08_18165 CDS
T07578
Symbol
crtH
Name
(GenBank) carotene isomerase
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00906
Carotenoid biosynthesis
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
JWS08_18165 (crtH)
Enzymes [BR:
phor01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
JWS08_18165 (crtH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
Pyr_redox_2
FAD_oxidored
HI0933_like
Thi4
FAD_binding_3
Pyr_redox
GDI
GIDA
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
UCJ11647
LinkDB
All DBs
Position
4182049..4183584
Genome browser
AA seq
511 aa
AA seq
DB search
MTATAASSPSQARSPQPYDAIIIGSGMGGLVTASQLASKGAKVLVLERYLIPGGSAGYFE
RSGYRFDVGASMIFGFGDEGTTNLLTRALEAVNMSLETVADPVQIHYHLPHQLDLKVHRH
YEGFISELTAKFPHERQGIRRFYDECWKIFNCLNSMELLSLEEPRYLMRVFFQHPLACLG
LVKYLPQNVGDIARRYIRDPELLKFIDIECYCWSVVPADLTPAINGGMVFSDRHYGGINY
PKGGVGTIAQALADGIEKAGGELRYKARVTEIIMEGRRAVGVKLASGESLYGRRIVSNAT
RWDTFEKLLPPEKMPPSERRWQTRYRKSPGFLSLHMGVAADVLPPNTECHHIILEDWQQM
EAAQGTLFVSIPTLLDPSLAPEGYHILHAFTPDWLESWQHLPPDEYEQRKEAAAWEVVDR
LEAIFPGLDAGLDYLEVGTPRTHRRFLGREEGTYGPIPRHKLPGLLTMPFNRTAVPGLYC
VGDSTFPGQGLNAVAFSGFACAHRIAVDLGL
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaacagcggcttcttccccctcccaggcgcgatcgccccaaccctatgatgcc
attatcatcggctcgggcatggggggcctcgtcaccgccagccaactggccagcaaaggg
gcaaaggttctggttctcgaacgctatctgatccccggcggcagtgccggctactttgaa
cgctcaggctatcgctttgatgtgggggcctcgatgatttttggctttggagacgaggga
accacgaacctactcacccgggccctagaggcggtgaatatgagcctggaaaccgtcgcc
gatcccgtccaaattcactatcaccttccccaccaattagacctaaaagttcatcgtcac
tacgaaggctttatcagtgaactcaccgccaagttcccccacgaacgccagggaattcgt
cgcttttacgatgaatgttggaaaatctttaactgtcttaacagcatggagttgctgtcc
ttggaggaaccccgctacctaatgcgggtctttttccaacatcccctagcctgtttagga
ttggtcaaatacttaccccaaaatgtcggcgatattgcccgtcgctatatccgagaccca
gaactgctgaaatttattgatattgaatgttactgctggtccgtggttccggcggatctc
accccagcaattaatgggggcatggtctttagcgatcgccactatggcggcatcaactac
cccaaaggcggcgttggaaccatcgcccaggccctagccgatggcattgaaaaagcgggg
ggagaactccgctacaaggcccgcgtcacagaaattatcatggagggccggcgagccgtt
ggcgtgaaactggcctccggggagagtctctatggccgtcgtatcgtctccaacgccacc
cgctgggacaccttcgagaaattgcttcctcccgagaagatgcccccctcagaacgtcgc
tggcagacgcgatatcgcaaatcccccggcttcttgagtctgcatatgggggtcgccgct
gatgtactcccccccaacacggaatgccatcatattatcctggaggactggcaacagatg
gaggcagctcagggaaccctatttgtctccattcccaccctcttagaccccagtctggct
cccgagggctatcatattctccatgccttcaccccggactggctggagtcttggcaacat
ctgccccctgatgagtatgaacagcgtaaggaggccgccgcctgggaggtggtcgatcgc
ctcgaagccattttccccggtttagatgccggattggactatctggaagtgggaaccccg
cgcacccatcgccgcttcctaggacgagaggaaggcacctatggccccattccccgccat
aaactccccggcttactgacgatgccctttaatcgcaccgccgttcccggtttatattgt
gtcggtgatagcaccttccccggtcagggactaaatgccgtcgccttttccggctttgct
tgcgctcatcgcattgccgtcgatttaggtctttag
DBGET
integrated database retrieval system
