Phormidium sp. PBR-2020: JWS08_19330
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Entry
JWS08_19330 CDS
T07578
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00860
Porphyrin metabolism
phor01100
Metabolic pathways
phor01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
JWS08_19330 (cobD)
Enzymes [BR:
phor01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
JWS08_19330 (cobD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CobD_Cbib
GIY_YIG_domain
Motif
Other DBs
NCBI-ProteinID:
UCJ14513
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Position
complement(4434450..4435448)
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AA seq
332 aa
AA seq
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MMAILLNDGAIALLIFLGALLLDYLLGDPWHWLHPVQVMGWVISAYTETALRLTQSPRWL
RWLGVGLTLLMVLGSGGLAWGMIALGGWIHPGVGAAIAIILFASCLAGRSLRRAAEDVLT
PILNGDVPAARQRLQNYVGRDTDHLTESEILRAILETVAENTVDGVTAPLFYGLVGSIVS
PGGAAVVALAYKSVSTLDSMVGYKRPPYIDIGWCSARTEDVLTWLPCRLTVLTIALLSGH
PHHLWGQCRQQARLDPSPNSGWSECAYALALGVELGGTNRYQGVVTEKPRLGKPDRPITA
SVVQEALGLTRRLLVWGSLVGVWWIWGRYRFG
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgatggcgattcttctcaatgatggggcgatcgccctgctgattttcctaggggccctc
ctcctcgactatctcctcggagatccttggcattggttgcatccggtgcaagtcatgggt
tgggtcatttctgcttataccgagacggccttgcgtctgactcaatcccctcgatggttg
cgatggctgggggtggggttaaccctgctgatggtcctcgggagtggggggctggcttgg
ggaatgattgccctggggggctggattcatccgggagttggggcggcgatcgccatcatt
ctgttcgcttcctgtttagccgggcgcagtttacggcgggccgctgaagatgtcttaacg
ccaattctcaatggagatgttccggccgcccggcaacggttacaaaactatgtgggacgg
gatacagaccacctcacggagtcagaaattttacgggcgattttggagacggtagcagaa
aatacggtggatggggtaaccgctccgttattctacggacttgttgggtcaatcgtatct
ccagggggcgcggcagtggtcgctcttgcctacaaatccgttagcaccctggattccatg
gttggctataaacgccctccctacatcgatatcggctggtgcagcgcgcgcaccgaggat
gttttaacctggcttccctgtcgtttaacagttttgaccatcgccctgctgtcgggccat
ccccatcatctctggggacaatgccgccagcaagcccgactcgatcctagccccaactcc
ggttggagtgaatgtgcctatgccttggccttgggagtcgagttgggcggaacgaatcgt
tatcagggggtggtgactgagaaaccccgtttaggcaaacctgaccgaccgattacagcc
tcagtggttcaggaggccttggggttaacccgtcgtctactagtctgggggtccctcgtc
ggagtatggtggatctggggacgttaccgcttcggctag
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