KEGG   Candidatus Sodalinema alkaliphilum: JWS08_19645
Entry
JWS08_19645       CDS       T07578                                 
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
  KO
K05844  ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
phor  Candidatus Sodalinema alkaliphilum
Brite
KEGG Orthology (KO) [BR:phor00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:phor03009]
    JWS08_19645 (rimK)
Ribosome biogenesis [BR:phor03009]
 Prokaryotic type
  ribosomal protein modification factors
   JWS08_19645 (rimK)
SSDB
Motif
Pfam: RimK Rimk_N GSH-S_ATP ATP-grasp_3 ATPgrasp_ST Dala_Dala_lig_C Herpes_ORF30 R2K_3
Other DBs
NCBI-ProteinID: UCJ11907
LinkDB
Position
complement(4515799..4516704)
AA seq 301 aa
MKIVILSQNPALYSTKRLREAGEQRGHQMRVIDHLRCYMSITSHRPSIIYQGNPLTDVEA
VIPRIGASHTFYGTAVVRQFEMMGVFTANESQAISRSRDKLRCLQILAREGIGLPVTGFA
HSTKDIEGLISIVNGAPLVIKLLEGTQGIGVVLAETTPAATSVIEAFRGLDANILVQEFI
KEAKGADIRCFIVNDKVVASMKRQGAPGEFRSNVHRGGKAEKIKLTPEERTTAVRAAKAM
GLKIAGVDLLRSNHGPVVMEVNSSPGLEGIEGSTGVDVAGKIIEFLEKKAGASAPRDRIP
Y
NT seq 906 nt   +upstreamnt  +downstreamnt
atgaaaattgtcatcctctcccaaaaccccgccctctattccaccaaacgcctcagagaa
gccggagaacagcggggtcatcagatgcgcgtcatcgaccatctgcgctgttacatgagc
atcacctcccaccgcccctcaatcatctatcaagggaatcccctcaccgacgtcgaagcc
gtcattcctcgcattggtgcgtcccataccttttatggcacagccgtcgttcgtcaattc
gagatgatgggagtcttcaccgccaacgaatcccaggccatctcgcgttctcgggataag
ttacgctgtctgcaaatcctggcccgcgaaggtattggcttacccgtcaccggctttgcc
cactccaccaaagacatcgaaggcctcatcagcattgtcaacggcgcacccctggtgatc
aaactcctcgaaggcactcaaggaattggagttgtcctcgccgaaaccaccccagccgcc
acgtccgtcattgaagccttccgggggttagatgccaacatcctggtgcaagagtttatc
aaagaagccaaaggggccgacattcgctgttttatcgtcaacgataaagtcgtcgcctcc
atgaaacgccaaggggcccccggcgaatttcgctccaacgtccatcgtggcggcaaagcc
gagaaaatcaaactcacccccgaagaacgcaccacagcggttcgcgccgccaaagccatg
gggttaaaaattgccggagtcgatttattgcgctccaaccacggccccgtcgttatggaa
gtcaactcatccccaggcttggaaggaatcgaaggctcaaccggagttgacgtcgccggt
aaaatcatcgagttcctagaaaaaaaggccggcgccagcgccccccgcgatcgcatcccc
tactaa

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