Phormidium sp. PBR-2020: JWS08_20625
Help
Entry
JWS08_20625 CDS
T07578
Name
(GenBank) SDR family oxidoreductase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00520
Amino sugar and nucleotide sugar metabolism
phor01100
Metabolic pathways
phor01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
JWS08_20625
Enzymes [BR:
phor01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
JWS08_20625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
KR
DUF1815
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
UCJ12077
LinkDB
All DBs
Position
complement(4738433..4739368)
Genome browser
AA seq
311 aa
AA seq
DB search
MRILVTGGAGFLGSHLVDRLMEQGHEVLCLDNFFTGRKDNILKWMDSPYFEVIRHDITEP
IRVEVDQIYHLACPASPVHYQYNPVKTVKTSVLGTLHMLGLAKRINARMLLASTSEVYGD
PDVHPQTEAYRGNVNPIGIRACYDEGKRIAETLCFDYHRQNNVDIRVMRIFNTYGPRMQE
NDGRVVSNFIVQALRGIPLTVYGDGQQTRSFCYVSDLIDGMMKLMNNDEHIGPVNIGNPN
EYTILQLAETIQRLINPDVEIQFEPLPQDDPQQRQPDITRAKEWLGWTPTIELEEGLKQT
IADFRDRLSLK
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattagttaccggtggtgcgggattcctgggttcccacctcgtcgatcgcctg
atggaacaaggccatgaagtcctctgtctcgataactttttcaccgggagaaaggacaac
atcctcaaatggatggattccccttattttgaggtgattcgccacgatattaccgaaccc
atccgtgtcgaagtggatcagatttatcatctggcttgtcccgcgtccccggttcactac
caatacaatcccgttaaaacggtgaaaaccagcgtcttggggacattgcatatgttaggg
ctggcgaaacgcatcaatgcccgtatgttgttggcctcgacctcggaagtctatggagac
cccgatgttcacccgcaaacggaagcctatcgggggaatgtgaacccgattgggatccgt
gcctgctacgacgaggggaagcgcatcgctgaaaccctctgtttcgactaccatcgtcaa
aataacgtcgatatccgggtgatgcggattttcaacacctatgggccgcgaatgcaggaa
aatgatggacgggtggtgagtaactttattgtccaggctctgcgggggattcctctgacg
gtgtatggggatggccagcaaactcgcagtttttgctatgtctcggacctcattgacggc
atgatgaagttaatgaacaatgatgagcatattgggccggtgaatatcggcaatcccaac
gagtacacgattctgcaactggccgagaccattcaaaggctgatcaaccctgatgtggag
attcagtttgagccacttccccaggatgatccgcaacagcgtcagccggatatcacgcgg
gccaaggaatggttgggttggacgccgacgattgaacttgaagaaggacttaaacaaacg
atcgccgatttccgcgatcgcctgagcttgaagtaa
DBGET
integrated database retrieval system
