Phormidium sp. PBR-2020: JWS08_20760
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Entry
JWS08_20760 CDS
T07578
Name
(GenBank) tetratricopeptide repeat protein
Organism
phor
Phormidium sp. PBR-2020
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_10
TPR_2
TPR_7
TPR_1
TPR_NPHP3
CHAT
TPR_MalT
TPR_8
TPR_14
TPR_11
SNAP
MIT
RNPP_C
TPR_SusR
SUCH1_C
TPR_16
AAA_16
ANAPC3
ATPase_2
AAA_22
NB-ARC
NACHT
TPR_19
AAA_33
AAA_5
nSTAND6
AAA_18
AAA_24
Motif
Other DBs
NCBI-ProteinID:
UCJ12099
LinkDB
All DBs
Position
complement(4772613..4776095)
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AA seq
1160 aa
AA seq
DB search
MRILHLRFRPTADPQQVELRYSYEVSSDYQSRRLNLDEIGDLIRQAETHVYTRIPGNLAR
QGQQLYTWLDGSDRWLTQALKENRRQTLVLAVDLQHRLAHLPWELLHDGAGFLVERRNPR
VVPMRWQGDNASETLPPPAPRPLHLLFMATSPEGVNVLNYEEEEGRILEATAKKPLTLTV
EESGCLSELGELLEDYEVGAIDVVHLTGHGTLRDGVPCFVTESEVGDPCYSNAEDLIDSF
GTRTPSLLFLSACETGLAQNEGNIPSLAEQLLQEGMKTVLAWGRPVLDRDATAAAAALYG
GLAAGDNLADALSKTYQALLKDKARDWYLLRCYGAGTVPVALVTAPRRQRAMAPRPRIRD
RNLDPEGRKLVATAGEFVGRRRAIQSSLQALKYDPDYLGVLIYGMGGLGKSTLAKRLSDR
LSDYTLLVWIDPMDSDSLLKRLSKEMGSDPKIWDILQDQDLQHQPELRLRRAFNYLDEMN
RREDQPQTRLLLLFDDFENSLEPHQGGYVPTPEAAAVLEMLLDTLGHSQTPHRLLITSRY
RFDFPQIDSLYPQPLDCLDEVEVRKKCQKLSLFSDETQGNTKTLEPELREEALRLADGYP
RLLEWLNQILQDEDINRREILAQLAAERAVELREQVLAAALWEQVDEPMRQMLQRGLVYE
LPVPEAALRAVCEGIGGLEALIDRAKGLGLLEVSPDASVRVPRLLPVELPEEVTPLQAEA
AKVLYRLWWHEAESATEAQRLEIHRLAVAGGEGKIAADITQALASRWIKQSRFRETRQLC
CQTLTVIEDYGTVHQLARAEERLGEVEEARSHYRRAQELCPEEDEREGAAIIHNQAGIYA
QQGQVQEALDLYQQSLDLQERIGDRQGKAASLHQIAGIYAQQGQVQEALDLYQQSLDLNE
RIEDRQGKAASLHQIAGIYAQQGQVQEALDLYQQSLDLQERIGDRQGKVASLHQMTGIYA
GQVQESLDLYQKSLDFQERIEDWQGKVASLHQMTGIYAGHGQVQEALDLYQQSLDLNERI
EDRQGKAASLHQIAGIYAQQGQVQEALDLYQQSLDLNERIGDRQGKAASLHQIAGIYAQQ
GQVQEALDLYQQSLDLKERIGNVQGKAASLVMMAQLLAVQGEVERACEYMQEAIAILDHL
KSPDAAIARRILSKIKNSQT
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
ttgcgaatcctacatctgcgcttccgtcccaccgctgacccccagcaggtggagctacgc
tacagttacgaggtttccagtgattaccagtcgcgccgtctcaacttggacgagattggc
gatctgattcgacaggcggaaacccatgtctacactcgcattccgggcaacttagcccga
caggggcaacaactctatacttggctcgatggctcagaccgctggctcactcaggcatta
aaggagaaccgccgtcagacgttggtgttggcggtggatttgcagcaccggctggctcac
ctcccctgggaactccttcatgatggggcgggtttcctggtagaacgacgtaacccgagg
gtggttcctatgcgttggcaaggggataatgcctctgagaccttgcccccaccggctcct
cgtcctttgcatctactgtttatggcaacctctcctgagggggtcaacgtcctcaactac
gaggaggaagaagggcggattttggaggcgacggcaaagaaacctctcaccctgacggtg
gaggagagtggctgtttgagtgagttgggggagttactggaagactacgaggtaggagcg
attgatgtggtacatctgacgggccatgggactcttcgtgatggggttccctgtttcgtc
actgagtctgaggtgggagacccctgctatagcaacgccgaagacttgatagatagcttc
ggtactcggacaccgtcgctgctgtttctctcggcctgtgagacgggactagctcagaac
gagggcaacatcccctccttggcggaacaactgttgcaagaagggatgaaaacagtcttg
gcttggggtcgtccggtgttggacagagatgctacggcggcggcggcggccctctatggg
ggcttggcagcgggggataatctggctgatgctctctccaaaacctatcaagccttattg
aaagataaagcccgagattggtatttgttgcgttgctatggggcgggaacggttcctgtc
gccttggtgacagctcctcggcgacagcgggcgatggccccgcgtccgagaatccgagat
cgcaaccttgaccccgagggtcgcaaattggtggcgacggctggggagtttgtgggacgg
cggcgggcaattcaaagcagtttgcaggctctgaaatatgacccggattatctgggggtc
ttgatttatggcatggggggactcgggaaaagtaccctggccaaacggctgtcagaccgg
ttatcggactatacattgctggtttggattgaccccatggactcggatagtttgctgaag
cggttgagtaaggagatggggagtgacccaaagatatgggatattttgcaagaccaagac
ctccagcatcaaccggagttgcggttgcggcgggcctttaactatctcgatgagatgaat
cggcgtgaggaccaaccccaaactcgtttgttgctgctgtttgatgattttgagaatagc
ctagagccgcatcaggggggctatgtaccaactcctgaggcggcggcggtgttggagatg
ttgctcgacaccttaggacatagccaaacccctcatcgtcttctcatcaccagtcgctat
cggtttgactttccccagattgactctctctaccctcaacctctcgattgcctggatgag
gtggaggtgcggaaaaaatgtcagaagttatctctgtttagtgatgagacgcagggaaac
accaagactctggaaccggagttacgggaggaggcgttacgtctggctgatggctatccc
cgtttgctggaatggctgaatcagattttgcaggatgaggacatcaatcgccgtgagatt
ttggcccagttggcggcggagagggctgtggaactgcgggagcaggtgttggcggcggcg
ttgtgggagcaggtggatgaaccgatgcggcagatgttgcaacggggattggtctatgag
ttgcctgtgccagaggcggcgttgcgggcagtctgtgaggggataggggggttggaggcc
ttgattgaccgcgccaaggggttgggactgttggaggtgagtcctgatgcgtcggtgcgt
gtacctcggctgttaccggtggagttgcccgaggaggtgacgccgttacaggctgaggcg
gcgaaggtgttgtatcggctatggtggcatgaggccgagtctgcgacggaggcgcaacgg
ctagaaattcaccgtttagcagtggcagggggagagggaaagattgcggcagacatcact
caagctttggcatcacgatggattaagcaaagtcgttttcgagagacgcgacaactctgt
tgccaaaccttaacagtgatagaagattacggcacagtccaccagcttgcccgagcggag
gaacgattaggagaggtggaggaggctcggagtcactaccgacgcgcccaggaactttgc
cccgaggaggatgagcgcgagggagcagctatcatccacaatcaggccggcatctacgcc
cagcaggggcaggtgcaggaggccctcgacctgtaccaacaatccctcgaccttcaagag
cgcatcggggaccggcagggaaaagccgcctccttgcaccaaattgctggcatctacgcc
cagcaggggcaggtgcaggaggccctcgacctgtaccaacaatccctcgaccttaatgag
cgcatcgaagaccggcagggaaaagccgcctccttgcaccaaattgctggcatctacgcc
cagcaggggcaggtgcaggaggccctcgacctgtaccaacaatccctcgaccttcaagag
cgcatcggggaccggcagggaaaagtcgcctccttgcaccaaatgacaggcatctacgcc
gggcaggtgcaggagtccctcgatctctaccaaaaatccctcgactttcaagagcgcatc
gaggactggcagggaaaagtcgcctccttgcaccaaatgacaggcatctacgccggacat
gggcaggtgcaggaggccctcgacctgtaccaacaatccctcgaccttaatgagcgcatc
gaagaccggcagggaaaagccgcctccttgcaccaaattgctggcatctacgcccagcag
gggcaggtgcaagaagccctcgacctgtaccaacaatccctcgaccttaatgagcgcatc
ggagaccggcagggaaaagccgcctccttgcaccaaattgccggcatctacgcccagcag
gggcaggtgcaggaggccctcgacctgtaccaacaatccctcgaccttaaagagcgcatc
ggcaacgtgcagggaaaagccgcctccttagtgatgatggcacaactgttggctgttcaa
ggtgaggtggagagagcctgtgagtatatgcaggaggcgatcgccatcttggatcacctc
aagtcccccgatgcagcgatcgcccgacgaatcctctcaaaaatcaaaaactcccagacc
taa
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