Phormidium sp. PBR-2020: JWS08_20835
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Entry
JWS08_20835 CDS
T07578
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00470
D-Amino acid metabolism
phor01100
Metabolic pathways
phor01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JWS08_20835 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
JWS08_20835 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
phor01011
]
JWS08_20835 (alr)
Enzymes [BR:
phor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
JWS08_20835 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
phor01011
]
Precursor biosynthesis
Racemase
JWS08_20835 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
UCJ12113
LinkDB
All DBs
Position
complement(4792848..4794035)
Genome browser
AA seq
395 aa
AA seq
DB search
MLTWERVVKFSQDQTFAGVCDRAWVEIDLQALAENVRQLRGLLYPGTGFMAVVKADGYGH
GAIPIAKTVLEAGATALGVATVEEGIELRQAGIEAPILVLGAIQSPPQIEALVRWRLEPT
LCDRPQAVRIAEIVGQLAPREPLPVHLKLDTGMSRLGVLWTEAVPFVRQVLELPQLHLAS
VYSHLATADEDDITMMRRQEERFQGAIAALKAAGITPPKLHLANSAATLCNPSSHYDQVR
VGLALYGLYPAPHLRSQVTLQPVLQVKARITQVKTLPPGTGVSYGHRFVTQRETRLAVVG
IGYADGVPRLLSNQLQGLLQGGDRVWRLPQVGTITMDQLMLDVTEVPEVQVGDVVTLLGT
LGEDSISADDWAEALGTISWEILCGFKHRLPRIQV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgctgacctgggaacgggttgttaaatttagccaggatcagacctttgcgggagtctgc
gatcgcgcctgggtggagattgatttacaggcgttggcggagaatgttcgtcagttacgg
ggccttctttacccagggacgggatttatggcggtggtgaaggcagatggctatggccat
ggggcgattcccattgctaaaacggttttagaggctggggccaccgccttgggagtggcc
accgtcgaggaagggattgaactgcgtcaggcggggattgaggccccaattcttgtcttg
ggggcaattcagagtccgccacagattgaagccttggttcgctggcggttggaacccacc
ctctgcgatcgcccccaggcggttcgcatcgctgagattgtggggcaactggccccccgt
gaaccgctgccggtgcatttaaagttagatacgggaatgtctcgcttaggggttctctgg
actgaggcagttccctttgtccgtcaggtgttggagttgccccagcttcatctggctagt
gtctattcccacttggctacggcggatgaggacgatatcaccatgatgcggcgacaggaa
gaacgcttccaaggggcgatcgccgccctcaaggccgccgggataactcccccaaaactc
catctggctaactccgccgccaccctttgcaacccgtcgagtcattatgatcaagtgcgg
gtgggattagccctctatggactctatcccgccccccatctgcgatcgcaggtgacgcta
cagccggttttacaggtcaaagcccgcattacccaggttaaaactcttccccccggaaca
ggagtcagttatggccaccgctttgtcacccaacgggaaacgcgcctagcggtggtgggg
attggctacgccgatggggttcctcgcctcttgtccaatcagcttcagggacttctgcaa
gggggcgatcgggtctggcgactgccccaggttggtacgattaccatggatcaactgatg
ttagatgtcaccgaggttcccgaggtgcaagtgggggatgtggtgacgcttttaggaacc
ttgggggaggactccatttctgccgatgactgggctgaggccttgggaaccatctcctgg
gaaattctctgtggttttaaacaccgtctccctcgcatccaggtttga
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