Phormidium sp. PBR-2020: JWS08_21205
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Entry
JWS08_21205 CDS
T07578
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor02024
Quorum sensing
phor03060
Protein export
phor03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
JWS08_21205 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
JWS08_21205 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JWS08_21205 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
phor02044
]
JWS08_21205 (ffh)
Enzymes [BR:
phor01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
JWS08_21205 (ffh)
Secretion system [BR:
phor02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
JWS08_21205 (ffh)
Eukaryotic Sec-SRP protein
JWS08_21205 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
ArsA_ATPase
CbiA
AAA_22
AAA_33
AAA_24
AAA_17
nSTAND3
ParA
AAA_16
AAA_30
6PF2K
AAA_28
AAA_31
Motif
Other DBs
NCBI-ProteinID:
UCJ12183
LinkDB
All DBs
Position
4875761..4877224
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AA seq
487 aa
AA seq
DB search
MFDAFADRLEEAWKKLRGQDKISEANIQDALKEVRRALLTADVNLQVVKQFIADVEEKAM
GAEVIAGVRPDQQFIKIVNDELVAIMGESNVPLAHADQPPTVVLMAGLQGTGKTTASAKL
ALHLRKLNRSSLLVATDIYRPAAIDQLKTLGEQIDVPVFDMGTDADPVEIARQGVEKAKA
DGIDTVIVDTAGRLQIDTEMMAELSRIKETIQPHDTLLVVDAMTGQEAATLTRTFDEEIG
ISGAILTKLDGDSRGGAALSLRRISGAPIKFVGMGEKVEALQPFYPDRMASRILGMGDVL
SLVEKAAEQVDLADAEKMQEKILSAQFDFNDFLKQTRLMKSMGSLGGIMKLIPGMGKQIS
DDDLQKGETQLKRSEAMIGSMTIDERTNPDLLSSSPSRRRRVAKGSGFDESDVNKLVSDF
KKMRSLMQQMGQGNLPGMGGGGMPGMNPFGGMFGGGGGGPRPGFRGPGGGKPKKKKKQKK
KKGFGEL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacgcatttgctgaccgcttagaagaagcctggaaaaagctccgaggacaagac
aagatctcggaggctaacattcaagatgccttgaaagaggttcgtcgcgctctcctcacg
gcggatgtgaacctacaagtggtcaaacagttcatcgctgatgtagaagagaaggcgatg
ggggcggaggtgattgctggggttcgcccagatcagcaattcatcaaaatcgtcaatgat
gagttggtggccatcatgggggagagcaatgttcccctagctcatgcagatcagccgcca
acggtggttctcatggcagggttacagggaaccggtaaaacgaccgcctcggcgaaatta
gccctccatttacgcaaactcaatcgctccagcctgctcgtagcgactgatatctatcgc
ccagcggcgatcgatcagctcaaaaccctcggcgaacaaatcgatgtcccggtgtttgat
atggggaccgatgctgatccagtagagattgcccgtcaaggggttgagaaagccaaagcc
gatggcattgacacggtcatcgtcgataccgctggccgcctacaaatcgacaccgagatg
atggcggagttgagccgcatcaaggagacaattcaaccccacgataccctcttggtggtg
gatgcgatgaccgggcaagaggccgccaccctcacccgcacgtttgatgaagaaattggg
atcagtggggcaattctcacgaagctggatggggacagtcggggtggggcggccctctcg
ctgcggcgtatctcgggggccccaattaagtttgtggggatgggagaaaaggttgaggcc
ctacaaccgttttaccccgatcgcatggcctcccggattttgggcatgggcgatgtgctg
tccttggtggagaaagccgctgaacaggtggacttggccgatgctgagaagatgcaggag
aaaatcctctcggctcagtttgactttaatgatttcctcaaacaaacccgcttgatgaag
agtatggggtctctggggggaattatgaagttaatccctgggatggggaaacagatttct
gatgatgatttacagaaaggggagacgcaactcaaacgttccgaggccatgattggctcg
atgaccatcgacgaacggaccaatcctgatttgttgtcgagttctccgagtcgtcgccgt
cgggtggcgaaagggtctgggtttgatgagtctgatgtgaataagttggtgagtgatttc
aagaagatgcgatcgctcatgcagcaaatgggccaggggaaccttccgggaatggggggt
ggcggaatgccggggatgaatccctttggtgggatgtttggcggcggcggtggcggcccc
cgtccgggcttccggggccccggtggcggtaagccgaagaagaagaaaaaacagaagaag
aagaaaggctttggggagttgtag
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