Phormidium sp. PBR-2020: JWS08_21570
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Entry
JWS08_21570 CDS
T07578
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
phor
Phormidium sp. PBR-2020
Pathway
phor00260
Glycine, serine and threonine metabolism
phor00460
Cyanoamino acid metabolism
phor00630
Glyoxylate and dicarboxylate metabolism
phor00670
One carbon pool by folate
phor00680
Methane metabolism
phor01100
Metabolic pathways
phor01110
Biosynthesis of secondary metabolites
phor01120
Microbial metabolism in diverse environments
phor01200
Carbon metabolism
phor01230
Biosynthesis of amino acids
phor01240
Biosynthesis of cofactors
phor04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
phor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JWS08_21570
09102 Energy metabolism
00680 Methane metabolism
JWS08_21570
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JWS08_21570
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
JWS08_21570
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
JWS08_21570
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
JWS08_21570
Enzymes [BR:
phor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
JWS08_21570
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
UCJ12245
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Position
4958970..4960253
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AA seq
427 aa
AA seq
DB search
MTQTNLDFLAASDPTLAEILNSELQRQQDHLELIASENFTSAAVLAAQGSVLTNKYAEGL
PNKRYYGGCEHIDRAEQLAIDRAKELFGAAHANVQPHSGAQANFAVFLALLKPGDTIMGM
DLSHGGHLTHGSPVNVSGKWFNVQHYGVSQETEQLDYEEIRQLALKHRPKLLICGYSAYP
RTIHFDKFRAIADEVGAYLLADIAHIAGLVASGHHPNPLPHCHVVTTTTHKTLRGPRGGL
ILTQDADLGKKLDKAVFPGSQGGPLEHVIAAKAVAFGEALKPDFKTYSGQVIENAQAMAS
QLQERGLKIVSNGTDNHLMLVDLRSVSMTGKRADALVSGVNITANKNTVPFDPESPFVTS
GLRLGSPAMTTRGMGVEEFKEIANIIADRLLNPEDEAVAETCRQRVANLCQQFPLYPHLR
IPVPAMA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgactcagactaacttagacttcctggctgccagcgatcccaccctggcggagatcctc
aactcggaactgcaacgccagcaggatcacctagaactcatcgccagcgaaaacttcacc
tccgctgcggttctagcggcccaagggtcggttctcaccaacaaatacgccgaggggctg
cccaacaaacgctactacggcggctgcgaacatatcgatcgcgctgaacaactggccatc
gaccgtgccaaagagctatttggtgcagctcacgccaacgttcagccccattccggcgcc
caagccaattttgccgttttcctagctttgctgaagccaggagacaccattatgggcatg
gatttgtctcatgggggtcacctcacccatggttctccagtgaatgtctcggggaaatgg
tttaacgtccagcattacggagtcagccaggagaccgaacaactcgactacgaggaaatc
cgccaactggccctcaaacaccggcccaaactcctcatctgcggctactccgcctatcct
cgcaccatccacttcgacaaattccgggccatcgccgacgaagtgggggcctatctcctg
gccgacattgcccacattgccggactcgtggccagcggtcatcaccccaaccccctcccc
cattgccatgtggtcaccaccaccacccacaaaaccctacgcggtccccggggaggtctg
attctgacccaggatgccgacttgggtaaaaaactcgataaagccgtcttccctggtagc
caaggcggtcccttggaacatgtcatcgccgccaaagccgtagccttcggagaagccctc
aaaccggacttcaagacctactccggtcaggtaattgagaacgcccaagccatggccagc
caactccaggaacggggtcttaaaattgtctccaatggcaccgataaccacttgatgctg
gtcgatttgcgatcggtaagcatgaccgggaaacgggccgatgccttggtgagtggggtt
aatatcaccgccaacaaaaataccgttcccttcgatcccgaatccccctttgtcaccagc
ggcttacgcctggggtcccccgccatgaccactcgcggcatgggtgtggaggaatttaag
gaaatcgcgaacattatcgccgatcgcctcctcaacccggaagatgaagccgtagctgag
acctgccgtcaacgagtcgctaacctctgtcagcagttcccgctgtatccacatttacgg
attccggttcccgctatggcgtag
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