Phormidium sp. PBR-2020: JWS08_21625
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Entry
JWS08_21625 CDS
T07578
Name
(GenBank) AraC family transcriptional regulator
Organism
phor
Phormidium sp. PBR-2020
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
DUF3606
Motif
Other DBs
NCBI-ProteinID:
UCJ12255
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Position
4968355..4969380
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AA seq
341 aa
AA seq
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MVHQIPVQSPVQGYARTQVVCFDRAYGDVLPEWVNNIQTSPGEPLLEHREVVLPGLELAY
VYSAVANVEHYTIPEGETHFSLDLDLNAPIISWTGHESLRSARQTIAIHRTQVEYTGVTP
PGWRCLYICMDNALLEQLDLLPASVWKKSQDPQEALLGFNVVTLDHFRSFIQAWFAPFAH
PHQFTAFSPVQASVLWLEFTETLQLLFDLSEASREAFLFDKPSRRYRYFSDACAWIEAHL
DQPLTVEILAKHLHVTPRALQYAFRDIAATSVAKYIQARRLHGVRETLLSGQFEGWDNDK
GAEPSIAAIARHYGFSHLGRFAQQFQQHFGVLPRQLRSRRS
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggttcatcagattcccgtacagtctccagtgcaaggatatgcgcggactcaggtcgtt
tgtttcgatcgcgcctatggggatgttttgcctgagtgggtcaacaacatccagacaagt
ccgggtgagccattactagagcatcgtgaagtggtcttaccgggactggaactggcctat
gtctattccgccgttgccaatgttgagcattacacaattcccgaaggggaaacccatttc
agccttgatcttgacctgaatgcaccgattatttcctggacgggccatgaatccttgcgc
agtgcgcggcagaccatcgccatccatcgcactcaggtagagtacaccggagtcacccca
cccggttggcgttgtttatatatttgcatggataatgccctacttgagcagcttgatttg
ctgccagcttctgtctggaaaaaaagtcaagacccccaagaggcgctactggggtttaat
gttgtcaccctagatcactttcgtagctttattcaagcttggtttgctccatttgctcat
ccccatcagttcacagcattttcaccggttcaggcatcagtattatggctggagtttacg
gaaaccctacaattgctctttgatttgagtgaagcgagtcgtgaagccttcttgtttgac
aaaccatcgcggcgctatcgctatttttctgatgcttgtgcctggattgaggctcatttg
gatcaaccgttgacggtagaaattttggcgaagcatcttcatgttaccccccgcgccttg
cagtatgcctttcgggatatcgcggcaactagcgttgctaagtacattcaagcacggcgg
ttacatggggtgcgcgagaccttgctttcaggtcagtttgagggctgggataatgataag
ggggctgagccatccatcgcggcgatcgcccggcactatggttttagccatttaggacgg
ttcgcacagcagttccagcagcattttggtgtactcccccgtcagttgcgatcgcgtcgc
tcctag
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