Phosphitispora sp. TUW77: ABFY19_01985
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Entry
ABFY19_01985 CDS
T10992
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phos Phosphitispora sp. TUW77
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phos03000
]
ABFY19_01985
Transcription factors [BR:
phos03000
]
Prokaryotic type
Helix-turn-helix
Other families
ABFY19_01985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
GAF
Mg_chelatase
PAS
PAS_4
AAA_2
PAS_9
HTH_28
PAS_8
HTH_30
AAA
DUF2089
AAA_3
MCM
HTH_50
HTH_7
AAA_PrkA
HTH_29
HTH_23
HTH_22
bpMoxR
AAA_7
Mga
AAA_16
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
XPO22286
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Position
413424..415466
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AA seq
680 aa
AA seq
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MEGVGEVLSHNCKENMLTTWTSFVNQGIVQKNWVRKEIEDSWRRSLAMAIDPTVDMPPEV
NFGDLEQRREAKRELLEISLPIMHKLHLFLRGTGFDVSLSDQDGVLLEHLPDTKIDWNFP
LNGCNVNEGIVGTNSLALAIRLKRPIQVLAAEHYLKAFHLLACSSAPIFGHFGEILGVLT
ISGNFEKFHSHTLGMAVAAVNAIEGHLKANIANHYQTTIVNSISEGIIAVDEKARITKIN
AVAATLLQVDPETIMYSSINELLGVPNPLLRSLQFGDIVIDEDFQTKNGKAKTNYTITCR
PIRNQQGKILGMVAIIKEVGALKRKVHQMARARARYDFDDLIGRHPSYLMTVELAKRAAK
SSSNILLLGESGTGKEVFAQAIHNVSSRSKDPFIAINCAAIPRELIGSEMFGYSDGAFTG
AKRGGNPGKFELAQGGTLFLDEIGEMPIELQPHLLRVLQEKVVTRIGGTQVIPIDVRVIA
ATNKDLYKEVEKGSFRKDLYYRLNVLNITMIPLRDRTDDIQPLAEFFMKKINNGLNKEKK
VLHPETLKILQIYQWPGNIRELENVIEKACHIATGEILTIDCLPKELLVSQTYEIINALS
PGELSVDEVIVKEIGKKLSKENIIQAVKHNQGNLTQTAKELGISRPTLYSKLKKYGIHVK
YKKADSTEHHEVMLLTKESK
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
ttggaaggggttggggaagtgctttctcataattgtaaagagaatatgttaacaacctgg
acatcttttgttaaccaggggatagtgcagaaaaactgggtgcgtaaggaaattgaagat
tcttggcgccgtagcttggctatggctattgaccccactgtcgatatgccacctgaagtt
aatttcggcgatttggagcagcggcgcgaggcaaagagggagcttcttgagatttcatta
cctataatgcataaacttcacttgtttctgagggggacgggttttgacgtatcactaagt
gaccaggatggagttctgcttgaacacttaccggacacgaaaatagactggaattttccg
cttaatggctgtaacgtaaatgaaggcattgttggaaccaattctcttgcactggcgatt
aggctgaagcgtcctattcaggttctcgctgctgagcattacctgaaggccttccacctt
ttagcctgttcgtctgcaccaattttcggccattttggagaaatattaggagtgctgacc
atatcaggtaattttgagaagttccattcccatacccttggtatggcggtggctgccgtc
aatgccattgaaggccacctgaaggcaaacattgccaaccattatcaaactactatcgtg
aactctatttctgaaggcattattgccgttgacgaaaaagcccgcatcaccaaaattaat
gctgttgccgctacattgctgcaagtcgatcctgagaccataatgtattcttccattaac
gagttacttggtgttcccaaccctcttcttcgttccttgcagtttggtgatatagttatt
gatgaagatttccaaacgaaaaatggaaaagcaaaaaccaattatactattacctgtcgg
ccaatcagaaatcaacagggtaaaatacttggcatggtggctattattaaggaagttggg
gcattaaaacggaaggtccatcagatggcgagggcaagagcaagatacgactttgatgac
ctcattggtcgtcatccctcttatcttatgaccgttgaactagctaagcgtgctgccaaa
tcttcctctaacatccttttacttggagagagtggtaccggtaaagaggtttttgcccaa
gccatacataacgtcagcagcaggtcaaaagacccttttattgctatcaactgtgctgct
attccgcgcgaactcattgggagtgagatgtttggttatagtgacggcgcatttactggt
gccaaacgaggggggaatccaggaaaatttgaattagcacaaggcggaaccctttttctg
gatgagattggtgagatgcccatcgagctccagcctcatctcctgcgcgtcctgcaggaa
aaagttgtgaccaggattggaggcacccaagttatcccaattgacgtaagggtgattgct
gccactaacaaagatttatataaagaggtggaaaaggggagtttcaggaaggatctctat
tatcgtctcaacgttttaaatattaccatgataccattgagagaccgtacagatgatatt
cagccactagccgaattttttatgaaaaaaataaataatgggttgaataaagagaaaaaa
gtgttgcatcctgaaactttgaaaattctgcagatatatcaatggccgggcaatatcaga
gaacttgaaaatgttatagaaaaagcctgtcatattgcaaccggagagattttgacgata
gattgtctgcccaaagagttattagtatcccagacctacgaaataattaatgcactatcg
cctggagaactatcggttgatgaagtaatcgttaaggaaatagggaaaaagctcagtaaa
gaaaatatcatacaagccgtaaaacataatcaaggcaacctgacccagacagccaaagaa
cttggcatttctcggcctacactttacagtaagttaaaaaagtatggaattcatgtcaaa
tataaaaaggctgattcaactgagcaccatgaggttatgttattgacaaaagagtcaaaa
taa
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