Phosphitispora sp. TUW77: ABFY19_04540
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Entry
ABFY19_04540 CDS
T10992
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
phos Phosphitispora sp. TUW77
Pathway
phos03030
DNA replication
phos03430
Mismatch repair
phos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABFY19_04540
03430 Mismatch repair
ABFY19_04540
03440 Homologous recombination
ABFY19_04540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phos03032
]
ABFY19_04540
03400 DNA repair and recombination proteins [BR:
phos03400
]
ABFY19_04540
Enzymes [BR:
phos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABFY19_04540
DNA replication proteins [BR:
phos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABFY19_04540
DNA repair and recombination proteins [BR:
phos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABFY19_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Herpeto_peptide
DUF6282
Motif
Other DBs
NCBI-ProteinID:
XPO22764
LinkDB
All DBs
Position
1002558..1005974
Genome browser
AA seq
1138 aa
AA seq
DB search
MQDFVHLHVHTEYSLLDGAARVRGLAAAAAANGMQALAVTDHGAMFGVIEFYKEAHKAGI
KPILGCEVYVAPRSMGDREPGKDDANYHLVLLAENETGYRNLLYIVSRAYTHGFYYKPRT
DKDTLRKYSQGLIALSGCLGGEIATAIKTSQFSLARGAAKEYEEIFGKGNFFLEMQEHGL
EGQRAVNAELVKISSELGIPLVATNDVHYVKKEDAEVQDVLLCIGTGKTLEDTDRMDFGT
QEFYFKDTAEMHLLFGEHPEALANTVRIAERCNVTLDFENTYLPEYQIPPGHTVETYLEK
LCIQGLAYRYPGAGPEVRERLDYELKVIADMGFSGYFLIVWDFVRFSRENGIPVGPGRGS
AAGSLVAYVLEITNVDPLKYDLLFERFLNPERVTMPDIDIDFCYEKREQVIRYVVDRYGE
ERVAQIITFGTMAARAAIRDVGRAMNMPYADVDRVAKLVPAELGITLDRALENGTELRRI
YDIDPGVKKLLDMARAIEGMPRHASTHAAGVVIGKEPLTAYLPLYRTTDGLVATQFPKDT
VEEIGLLKMDLLGLKTLTIIGNALNIIKHISGVQIDIDTIPMDNRAVFDMLGKGESIGVF
QLESSGMRAILKELKPEVFEDIIALVALYRPGPLGSGMVEDFIRRKHGESLITYLHPSLE
PILRETYGVILYQEQVMRIAGDLAGFTMGEADLLRRAMGKKKPEVISGLRSQFVKGAEDK
GIAPDIAGQIFDLMEFFAGYGFNKSHSTAYALISYQTAYLKANYPVAFMAALLTGAIDSG
DKVALYIEECRKEGIDVLPPDVNESLVSFTVVCDKIRFGLAAVKNVGRSAIENIIAARKQ
DGPFTSLQDFCERVDHRHVTKRTLESLIKCGAMDSLGAKRAQLVAAADKCMDAAQQSQKD
QANGQISLFDLGGSNPILEKTAEPLPNVSEFPAREMLAMEKELLGLYISGHPLKEYEDVL
RERVSHNTAQLADLTDETPVVVGGVMAGMRQITTRKGEPMGFLALEDLLGSVEVVVFPKV
YRENRFLLKPDAAILVRGRVNFNTRDEQVKVIAERISGLDDRPPVTVYLKVPETDTENQL
SGIKEILCRNTGNNPVVLYFESSKKVIRTSKEWWIDSSSGALTELTQLLGENSVCVKE
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatttcgttcatctacatgtacatactgaatacagccttcttgatggagcggca
cgcgtcaggggattggcggcagccgcagccgcaaatggcatgcaggccttggcagttact
gaccatggggctatgtttggggttattgagttctataaggaggctcataaagccggcata
aaaccgattcttggctgtgaggtttatgtggcgccgaggtcaatgggagaccgggaaccg
ggtaaggatgatgctaattatcacttggttcttttggctgaaaacgagactggttaccgt
aacctgctttacatagtttctcgtgcctatacccatggattttactataagcccaggact
gataaggataccctgaggaagtatagtcagggactaattgccctgagcggctgcctgggc
ggggaaatcgccactgctataaaaacttctcagtttagcttagccaggggagcagcaaag
gaatatgaagaaatatttggcaaagggaatttttttcttgaaatgcaggaacatggctta
gagggtcagagggctgttaatgccgaactggtaaagatcagcagcgagctggggatacca
ctggtggcgactaatgatgttcattatgtcaaaaaagaagatgctgaggttcaggatgtc
ctgctttgtattggaacgggaaaaaccttggaagatacggaccgtatggactttgggaca
caggagttttattttaaggatactgctgaaatgcatctgctttttggagaacacccggag
gccctggcgaacactgtaagaatagccgaaaggtgcaatgtgacccttgattttgagaac
acttacctgcccgaataccagattcctccgggccacactgtagaaacttatcttgagaaa
ctttgtattcaggggttggcataccgttaccccggtgccgggccggaggtcagggagaga
ctggattatgagctgaaggtaatcgctgatatgggattttccggctatttccttatagta
tgggattttgttaggttttccagggagaacggtattccggtaggcccggggcgcggcagt
gcggcagggagtctggtcgcatatgttctggaaattaccaatgtagacccactgaaatat
gaccttctgtttgagaggttcctgaacccggagcgggtgacgatgcctgatatagatatt
gacttctgttacgaaaaacgggaacaggttatcaggtatgtggtagaccgttacggggaa
gagcgggtggcccagattattacctttggtacaatggcagcccgtgcagctatcagggat
gtgggcagggcgatgaatatgccttatgccgatgtggaccgggtagccaaactggtgccc
gcggaactggggattacccttgaccgggctttggagaatgggactgaactgcgccggatt
tatgacattgatcccggtgtgaagaaacttcttgatatggcccgggctattgagggtatg
cccagacatgcatctactcatgcggccggtgttgttatcggtaaagagccgttgactgct
tacctgccgctatacaggaccaccgatggattggtggcaacacagtttcccaaagacact
gtggaagaaatcggactccttaaaatggacctgctgggtttaaagacactgacgataatt
ggtaatgccctaaatattatcaaacatatctcaggagtgcaaatagacattgacaccatc
cccatggataaccgggctgtttttgatatgttggggaagggtgaaagtattggggtattt
caattggaaagctccgggatgagggcgattcttaaggaattaaagcccgaggtgtttgaa
gatattattgccctggtggcgctgtaccgtcccggtcccctggggagcgggatggtggaa
gattttatcaggcgcaaacatggtgaaagcttgattacctacctgcatccgtcattggaa
ccgattctgcgggaaacatatggtgttattctataccaggaacaggttatgagaatagcc
ggtgacctggccggatttacaatgggtgaagccgatttgctgaggcgtgctatgggtaaa
aagaaacctgaggttatttccggacttaggagccagtttgttaagggcgctgaggataaa
ggaattgcacctgacattgccggacagatatttgacctcatggagttcttcgccggttac
ggctttaacaagagtcacagtacagcttatgccctgatatcatatcagactgcttacctg
aaggccaattatccggttgctttcatggcggcactgctcaccggagctattgattccggt
gacaaggtggctctgtatatcgaagaatgccgcaaggaagggatcgatgtcctgcctcct
gatgttaatgaaagccttgttagttttacggttgtgtgtgataagattaggtttggtttg
gcagcagtgaaaaacgtagggcggtcagcaattgaaaatatcattgcagcccgtaaacag
gacgggccgtttacgtccctgcaggatttttgtgaacgggtggatcaccggcacgtgacc
aaacgcaccttggagagccttatcaaatgcggggctatggattctttgggggcaaaacgt
gctcagcttgttgctgcggccgataagtgtatggatgctgcccagcagagtcagaaggat
caagccaatggtcagatatccctctttgacctgggaggtagcaatcctatcttggaaaag
actgcagaacctttgccaaatgtgtccgaatttcctgccagggagatgctggcaatggaa
aaggaacttctagggctttatataagcgggcatccccttaaggaatatgaggatgtcctc
agagaaagagtgtcacataacacagcacagcttgcagacctgaccgatgagaccccggtt
gttgtcggtggcgttatggccggaatgcgccagattacaacccggaagggggaacctatg
ggatttttagccctggaggacctgcttggcagtgtggaagttgtggttttcccaaaggtt
tacagggaaaacaggtttctgctgaaacctgatgccgcgatacttgtcaggggaagggta
aactttaacaccagggatgagcaagtcaaggttattgcagaacgaatttcagggcttgat
gataggcccccggtcactgtttatctgaaagtgcccgaaactgataccgagaaccagtta
tcaggaataaaggagatattatgccgtaacacggggaataatcctgtggtactatacttt
gaatcaagcaaaaaagtcatcaggacttcaaaggaatggtggatagacagttcatcaggt
gcgcttacagaattgactcagctgctgggtgagaattccgtatgtgttaaggagtga
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