Phosphitispora sp. TUW77: ABFY19_05470
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Entry
ABFY19_05470 CDS
T10992
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
phos Phosphitispora sp. TUW77
Pathway
phos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABFY19_05470 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phos03400
]
ABFY19_05470 (ruvB)
Enzymes [BR:
phos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABFY19_05470 (ruvB)
DNA repair and recombination proteins [BR:
phos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABFY19_05470 (ruvB)
RecFOR pathway proteins
ABFY19_05470 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
Sigma54_activ_2
AAA_16
nSTAND3
AAA_22
AAA_3
AAA_14
NTPase_1
TsaE
MCM
AAA_18
RNA_helicase
NB-ARC
IstB_IS21
Bac_DnaA
AAA_33
AAA_17
DUF815
Resolvase
AAA_28
Rad17
ABC_tran
AAA_24
NACHT
DUF5983
Motif
Other DBs
NCBI-ProteinID:
XPO22934
LinkDB
All DBs
Position
1199302..1200327
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AA seq
341 aa
AA seq
DB search
MEERIVSSGVKEEDMEIEYSLRPRRLSEYIGQSKIKENLSVFIEAAQGRGDSLDHVLLFG
PPGLGKTTLAHIIANEMGVNVRITSGPAIERPGDLAAILTNLSTGDVLFIDEIHRLNRSV
EEVLYPAMEDFALDIIIGKGPSARSLRIDLPKFTLIGATTRAGLLTSPLRDRFGVISRLE
FYDTAELTEIVVRAARILAVEIDGQGAGEIAARSRGTPRVANRLLKRVRDFAQVRADGRI
TLEVAQQALTMLEVDRLGLDNTDRRLLSTLILKFGGGPVGLDTLSAAIGEESDTIEDVYE
PYLLQLGFINRTPRGRVVTSLAYEHMGITADEKPEQQNLWK
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggaagaacgtattgtttcatcaggtgtcaaggaagaggacatggaaatagaatatagc
ctgagaccgcgcaggttatctgaatacattggacagtccaaaataaaggaaaacctttct
gttttcatagaagctgctcagggcaggggagattccctggaccatgtactcttatttggt
ccgcccggccttgggaaaacaacacttgcccatataattgcaaatgagatgggcgttaat
gtcaggataacatcaggcccggcgattgagcggcccggagatttggctgccatacttacc
aacctgtcaaccggcgatgttctctttattgacgaaattcacagattgaatcgcagtgtg
gaagaagtgctttatccggccatggaagactttgctttggatataataattgggaaaggc
cccagtgccaggtccctaagaatagacctgcccaagtttaccttgattggggccactact
cgtgcgggtttgctgacatctccattaagggatcgttttggtgtaatcagccggctggaa
ttttacgataccgcagaacttactgaaattgtggtcagggcagccagaatacttgctgta
gaaattgatggtcagggggctggagaaattgccgcacgttccagggggactcccagggtg
gctaaccggctgctgaaacgggttcgtgactttgcgcaggtacgggcggatggcagaatt
acccttgaggtggcccaacaggcgttgactatgctggaggttgacagacttggtcttgat
aacactgaccgcagattgttatcaacattgattctgaaatttggcggcggaccggtgggg
ctggatacacttagtgcggccataggtgaagagtctgacacaattgaagatgtttatgaa
ccataccttttgcagcttggttttattaaccgcacacccaggggcagggttgttacctct
ttggcttatgagcatatgggaataaccgcggatgaaaagccggaacagcaaaacctatgg
aaatag
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