Phosphitispora sp. TUW77: ABFY19_06875
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Entry
ABFY19_06875 CDS
T10992
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
phos Phosphitispora sp. TUW77
Pathway
phos03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABFY19_06875 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phos03019
]
ABFY19_06875 (rny)
Messenger RNA biogenesis [BR:
phos03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ABFY19_06875 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF3149
KH_KhpA-B
FUT8_N_cat
SpoVR
Motif
Other DBs
NCBI-ProteinID:
XPO23234
LinkDB
All DBs
Position
complement(1459957..1461495)
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AA seq
512 aa
AA seq
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MTGQTILIAVVTGIIAFIVGYFIRKSLAEAKISSAEEAATKIIEEAEKVSEAKKREAILE
AKEEVHKLRNEVEKEHRERRNELQRMERRLTQKEETLDRKIESIERKEESLGQKENEIEK
VRIQIKELHVKQLAELERLSGLTSEEAREVLLANIQEEIGHEAAMMIKEIESKAKEEGEK
KAKDIISLAIQRCAADHVAETTVTVVALPNDEMKGRIIGREGRNIRTLETLTGIDLIIDD
TPEAVILSGFDPIRREVARIALEKLILDGRIHPARIEEMVEKAQKEVEAQIKESGEQATF
ETGVHGLHPELIKLLGRLRYRTSYGQNVLKHSIEVSQLAGLMAAELGVDVTLAKRAGLLH
DIGKSIDHETEGPHVTIGADLAKKYKESPVIINAIAAHHGDQDAKTIEAILVQAADAVSA
ARPGARRETLESYIKRLEKLEAITNSFDGVEKSFAIQAGREVRVMVKPDKIDDLSSVRLV
RDIAKRIEEELEYPGQIKVMVIRETRAVEYAK
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
attacaggacaaacaatattgatagctgttgttacaggtattattgcattcattgttggc
tacttcatcaggaaatcattggcagaggcaaaaatatcttcagcggaagaagctgccaca
aagataatcgaagaagctgaaaaagtctctgaagctaaaaaaagagaagcaattctggaa
gccaaggaagaagtccataagcttcgcaacgaagttgaaaaagaacaccgggaacgcaga
aatgaactccaaaggatggaacgacggttaacccagaaggaagaaactctcgatagaaaa
atagaatcaattgaacgcaaagaagaaagcctaggtcaaaaggaaaatgaaattgaaaaa
gtaagaatacaaattaaagagcttcatgtaaaacagcttgcagaactggaacgcctatcc
ggcctcacttcagaagaagctcgtgaagttcttctggcaaatattcaagaggaaattggg
catgaagcagcaatgatgattaaagaaattgaatctaaggccaaggaagaaggggaaaag
aaggccaaagacataatttcattggcaatccagagatgtgctgcggaccatgtagctgaa
acaacggtaaccgtcgttgctcttccgaatgatgaaatgaagggtcgtattataggtcgt
gagggaagaaatatccggacactggaaacccttacaggtattgatttaataattgatgat
acacctgaagcagttattttatcaggatttgacccgattcgacgtgaagttgccaggata
gcccttgaaaaattaattcttgatggaagaatacatcctgccagaattgaagaaatggtt
gaaaaagctcagaaagaagtcgaagcacaaatcaaagaatctggggaacaggcaactttt
gaaacaggggtacatggtttgcatccagaactgattaaacttcttggcaggctaaggtat
cgtacaagctatggtcaaaatgttttaaaacactcgattgaggtatcacagcttgccggg
ctaatggccgctgaacttggagttgatgttactcttgctaaaagagcgggcctgcttcat
gacattgggaaatccatcgatcacgagactgaagggcctcatgtgacaattggagctgat
ttagcgaagaaatacaaggagtcgccggtgataataaatgcaattgccgcacaccatggt
gatcaggacgcaaagaccattgaagcaatactggttcaagcggctgatgcagtttctgca
gctaggccgggggccagaagagaaactcttgaatcatatattaaacgtctggaaaaactc
gaagcaattaccaactcgtttgacggagttgaaaaatcttttgcaatccaagcagggcgc
gaagttcgggtaatggttaaacctgacaagatagatgatttatcttctgtacgcctggta
agggatatagctaaaaggattgaggaagagcttgaatatcctggtcagattaaagtaatg
gtaatacgggaaaccagggcagtagaatatgcaaaataa
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