Phosphitispora sp. TUW77: ABFY19_06930
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Entry
ABFY19_06930 CDS
T10992
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
phos Phosphitispora sp. TUW77
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phos03009
]
ABFY19_06930 (rimO)
Enzymes [BR:
phos01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
ABFY19_06930 (rimO)
Ribosome biogenesis [BR:
phos03009
]
Prokaryotic type
ribosomal protein modification factors
ABFY19_06930 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
NAGidase
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XPO20657
LinkDB
All DBs
Position
complement(1471772..1473124)
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AA seq
450 aa
AA seq
DB search
MCKINILSLGCAKNLVDSEVMTGMLRKAGYEITETQEGADLLIINTCGFIADAKEESVDA
LLEAVKLKNQGSCRAVVAAGCLAQRYSGEILQEIPEIDCIIGTGEVPSIVRVVKAAADGQ
KMMCVSAAPSFIYNHNMPRELLTPPYSAYIKVAEGCNNRCTYCVIPQIRGEYRSRKMESI
IAEAQRLAETGVREINLIAQDTTRYGLDIYGEYKLNELLQELSEINGLEWIRILYAYPNH
FTHSLIEAIAANDKICKYLDIPLQHADDYILSKMNRHGRTEDLLNLIKKIRQNIPGVALR
TSLIVGFPGETDKEYQTLVDFVKKVHFDHMGVFVFSPEEGTPAAEMAGQVPDDIKEYRKD
RLMNIQQEISYAKNIAKIGQIISVLIEGKVETGPELSELYVGRTEYDAPEVDGTVSVMGV
NLNPGDIVPVKITHAYDYDLIGEVINESPQ
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcaaaataaatatattaagtctgggctgtgctaaaaacttggttgattcagaagta
atgaccggcatgctgcgaaaggcaggctatgaaattactgaaactcaggaaggtgcagac
cttttaataataaacacatgtggttttatagccgatgccaaggaagaatcagttgacgct
ttgttggaagccgtaaaactaaaaaatcaaggttcctgcagggctgttgtggctgccggc
tgtttagcccagcgatatagtggtgaaattctacaggagattccagaaatagattgtatt
attggcacaggcgaagtaccaagcattgttagagttgttaaggctgctgctgatggccaa
aaaatgatgtgtgtttcagcagcaccttcttttatttataatcataatatgcctcgggaa
ctcctgactccgccttattcggcttatataaaggtagccgagggctgtaacaacaggtgt
acttattgtgtaattccccaaataagaggagagtaccgcagccgaaaaatggagtccata
atagctgaagcacagcggcttgctgaaactggagttagggaaattaacttgattgcccaa
gataccaccagatatggacttgatatttatggtgaatataagctcaatgaattgcttcaa
gaactttcagaaataaacggattagaatggatccggatactatatgcatatccaaaccat
tttacacacagccttattgaagccattgctgctaatgataaaatatgtaaataccttgat
attcccttgcagcacgcagatgattacatacttagtaagatgaacaggcacggcagaact
gaagatttgctcaatctcattaagaaaatcaggcaaaacattcccggagtcgctctaagg
acatctttgatagtaggttttccaggtgaaacagataaagaataccagactttggttgat
ttcgtaaaaaaggttcattttgaccatatgggtgtattcgtgttttccccggaagaaggc
accccggctgctgaaatggcgggccaggtacctgatgatatcaaagaatacagaaaagac
cgattaatgaatattcagcaggagatttcttatgcaaaaaacatcgccaaaattgggcaa
ataatttctgttttgattgaaggaaaagtcgaaactgggccagaattatcagaattatat
gttggccgtacggaatatgatgctcctgaagttgatggtacagtatcagtcatgggtgtg
aacctgaaccctggtgatattgttcctgttaaaattacacatgcatatgattatgattta
ataggagaggtaataaatgaatctccccaatag
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