Phosphitispora sp. TUW77: ABFY19_08215
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Entry
ABFY19_08215 CDS
T10992
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phos Phosphitispora sp. TUW77
Brite
KEGG Orthology (KO) [BR:
phos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phos03016
]
ABFY19_08215 (truB)
Enzymes [BR:
phos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABFY19_08215 (truB)
Transfer RNA biogenesis [BR:
phos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABFY19_08215 (truB)
Prokaryotic type
ABFY19_08215 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PUA
GD_AH_second
Motif
Other DBs
NCBI-ProteinID:
XPO23245
LinkDB
All DBs
Position
complement(1734032..1735000)
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AA seq
322 aa
AA seq
DB search
MIIQPSGINGILNVFKPPGMTSHDVINYLRRTLKEKKAGHTGTLDPNVAGVLVVCLGKAT
RVIEYLDDNVKCYRAEITFGSSTDTQDGYGQVLKTNNASGISWQEAEKALLAVKGLQQQL
PPMVSAVKHKGRKLYEIAREGLEVERRPRTIEVFDIKMIKHWRFGTPNPSLLFDITCSRG
TYVRTICHDLGESLGLGAYMSFLARTGSGQFHLDDSLLLEEIVSLYEQGQLQTKLIPIDQ
VLPFEEVWVHDDTVKSIQHGNLVYEPGVLQQPAELRENQHVKLMTSKAGCLAVARVSVRQ
NDKAQSLNSQNGLVFQPVKVFC
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgataatacagcccagtgggataaacggaatactaaatgtttttaagccgccgggaatg
acatctcacgatgtaataaattatctgcgccggaccttaaaggaaaaaaaagccggtcat
accgggacactagatcccaatgtggctggtgtattggttgtatgcttgggtaaggcaacc
agggtaattgaatacctggatgataatgtaaagtgctaccgggcagaaatcacctttggt
tccagtaccgatactcaagatggatatgggcaggtgttaaaaacaaataatgcttccggt
atttcatggcaagaggcggaaaaagcgcttttggcagttaaaggacttcaacagcaactg
ccgccaatggtttctgcagtaaaacataagggcaggaaactttatgaaattgccagggaa
ggtttagaagttgaacgcagacccagaactatagaagtttttgatataaagatgattaag
cattggagattcgggacacccaatccaagtctgttgtttgacataacttgctccagggga
acttatgtccggacaatatgtcatgatttaggtgagagccttgggttgggagcttatatg
tcttttttggcaaggacaggaagtggacaatttcatttggatgattcattgttattggag
gaaattgttagtttgtatgagcagggtcagctccaaacgaaacttattccaatagaccag
gtcctgccttttgaagaggtatgggtgcatgatgatacagtaaaatcaatacaacatggc
aacctggtatatgagccgggagttttgcagcagccggccgagctcagagaaaatcagcat
gtaaagctgatgacttcaaaagcaggctgtctggccgttgccagggtttctgtccggcag
aatgataaagctcaatcccttaacagtcaaaacgggcttgtttttcaaccggttaaagta
ttttgctag
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