Photobacterium sp. CCB-ST2H9: L4174_000095
Help
Entry
L4174_000095 CDS
T10200
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot00071
Fatty acid degradation
phot00280
Valine, leucine and isoleucine degradation
phot00310
Lysine degradation
phot00362
Benzoate degradation
phot00380
Tryptophan metabolism
phot00410
beta-Alanine metabolism
phot00640
Propanoate metabolism
phot00650
Butanoate metabolism
phot00907
Pinene, camphor and geraniol degradation
phot00930
Caprolactam degradation
phot01100
Metabolic pathways
phot01110
Biosynthesis of secondary metabolites
phot01120
Microbial metabolism in diverse environments
phot01200
Carbon metabolism
phot01212
Fatty acid metabolism
Module
phot_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
L4174_000095 (fadB)
00650 Butanoate metabolism
L4174_000095 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
L4174_000095 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
L4174_000095 (fadB)
00310 Lysine degradation
L4174_000095 (fadB)
00380 Tryptophan metabolism
L4174_000095 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
L4174_000095 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
L4174_000095 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
L4174_000095 (fadB)
00930 Caprolactam degradation
L4174_000095 (fadB)
Enzymes [BR:
phot01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
L4174_000095 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
L4174_000095 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
L4174_000095 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
L4174_000095 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
UTM57348
LinkDB
All DBs
Position
1:complement(21822..23984)
Genome browser
AA seq
720 aa
AA seq
DB search
MIYQGETLSVSYLEDGIAEIKFNAPGSVNKLDRKTLENLSEAINALYQQTELKGVLLTSG
KPAFIVGADVTEFPDIMTQEAETLSSWLADANAIFNRLEDISVPTVSAINGFALGGGCEC
ILATDIRVADTTALVGLPETKLGIMPGWGGSVRLPRLIGADQAMDIIAAGKAKKAPEALK
LGLVDAVVAPEALHDAALTMLKDAIAGKLDWQSRRAQKQAPLKLNKIEASMSFTMAKGMV
MQVAGPHYPAPITAVKCIEEAARMSRDEALKVENKGFVALAKSQVAPALVGIFLNDQYIK
GKAKQAAKEGKDTQRAAVLGAGIMGGGIAYQSALKGVPVMMKDIAQPSLDLGMTEASKLL
NKQLERGKLNGLKMAKILASIQPTLHYAGIEDADVIVEAVVENPKVKAAVLAEVEERVSE
DTVITSNTSTIPINVLAKSLKRPEKFCGMHFFNPVHRMPLVEIIRGEHTSEETISRVVAY
AAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFTKIDKVMEKKFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPERMSKDYKDAVDVMFENQRLGQKNGKGFYAYSIDKKGKP
KKDLAPEVAELLAPVVSRTADFSDEDIIARTMVPMINEVVRCLEEGIVATPAEADMALVY
GVGFPPFRGGVFRYLDTIGLANYVAMADQFAHLGAVYEVPAGLREKAEKGESYYNAPVNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtgaaaccctgtccgtaagctatctggaggatggcattgcggaaatc
aaattcaatgcgccaggcagcgtgaataagctggatcgcaagaccctggaaaacctcagt
gaagctatcaatgcgctgtatcagcaaaccgaactgaaaggtgtactcctgacgtccggc
aaacctgcttttattgttggtgcagatgtgaccgagttccctgacatcatgacgcaggaa
gctgagaccctgtccagctggctggctgacgccaacgccatttttaaccgcctggaagac
atttctgtcccgaccgtttcagcgattaacggttttgcgctgggcggcggctgcgaatgt
attctggcgacagacattcgtgttgccgacacaaccgcactggtcggcctgccagaaacc
aaactgggtatcatgcctggctggggtggctccgtacgcctgccacgcctgatcggtgcc
gatcaggcgatggacatcatcgccgcaggtaaagcaaagaaagctccggaagccctgaag
cttggcctggttgatgccgttgttgcacctgaagccctgcacgacgcggcgctgaccatg
ctgaaagatgcgatcgccggtaaactggactggcagtctcgccgtgcccaaaaacaggct
ccgctgaaactgaacaaaattgaagcctccatgagtttcaccatggccaaaggcatggtg
atgcaagttgcaggtccgcactatcctgccccgatcacggcggtcaaatgtattgaagaa
gccgcgcgcatgagccgcgacgaagcactgaaagtcgaaaacaaaggctttgttgcgctg
gcgaaaagccaagtggctccggcactggttggtatcttcctgaatgaccagtacatcaaa
ggcaaagcgaagcaagcagccaaagaaggcaaagacacccaacgtgcagccgtactgggt
gccggtatcatgggtggcggtattgcttatcagtctgcactgaaaggcgtaccggtgatg
atgaaagacatcgctcagccatcgctggatctggggatgaccgaagcttccaagctgctg
aacaagcaactggagcgcggcaagctcaatggcctgaaaatggcaaaaatcctggcgtct
atccagccgaccttgcattacgccggtattgaagatgctgatgtgattgttgaggctgtg
gttgaaaatccgaaggtaaaagccgcggttctggccgaagttgaagaacgtgtgagtgaa
gacactgtgatcacgtcaaatacctcgaccattccaatcaacgtgctggcaaaatcactc
aaacgcccggaaaaattctgtggcatgcacttcttcaacccggtacaccgcatgccgctg
gttgaaatcatccggggtgaacacacttcggaagaaaccatttcccgcgtggtggcatac
gctgccaaaatgggtaaatccccaattgtggtcaatgactgccctggattcttcgtcaac
cgggttctgttcccttactttgccggttttagcctgctgctgcgtgacggcgccgatttc
accaagatcgataaagtgatggagaaaaaattcggctggccgatgggccctgcttatctg
ctggatgtggttggtattgataccgcgcaccacgcgcaggcagtcatggctgaaggtttc
cctgagcgcatgagcaaagactacaaagatgctgttgatgtgatgttcgagaaccagcgt
ctgggccagaagaacggcaaaggtttttatgcctattccatcgacaagaaaggcaagccg
aagaaagatctggcaccggaagtggctgaactgctggcgcctgtggtcagccgtaccgct
gatttcagtgacgaagacatcattgcccgcaccatggttccgatgatcaacgaagtcgtt
cgctgtctggaagaaggcattgttgcgaccccggcagaagcagatatggcactggtgtat
ggtgtgggcttccctccgttccgtggtggcgttttccgttacctggataccatcggcctg
gcgaactatgtggcaatggctgatcaattcgctcatcttggcgcggtttacgaagttcct
gccggtcttcgtgagaaggcagagaaaggcgaaagctattacaacgcacccgtaaacgct
taa
DBGET
integrated database retrieval system
