KEGG   Photobacterium sp. CCB-ST2H9: L4174_000430
Entry
L4174_000430      CDS       T10200                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
phot  Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:phot00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:phot02048]
    L4174_000430
Enzymes [BR:phot01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     L4174_000430
Prokaryotic defense system [BR:phot02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   L4174_000430
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII Helicase_C
Other DBs
NCBI-ProteinID: UTM57397
LinkDB
Position
1:95402..98680
AA seq 1092 aa
MNNSNHLPNFKEEQSAKIPALTLLTNLGYQFISPSECMAMRGNKTTVILPQVLRKVLSFK
TYSFMGKERHLSQAAIDKIVQELANPAMNEGLKAANEKLYNALTYGISVTEFVEGKKANP
TIQIIDWDTPENNQFHFTEEMEVDNARSTGKRIPDVVCFVNGLPWVVIEAKRPDSSINGK
PTITEGISQNIRNQKVDEIPHLFAYSQLLLSINGHDGLYGTCGTPEKFWAKWKEEDITES
TFERIKNTPLNDAQLNAIFSHRTPAIKDEYLSLIAGGDLVVTDQDRLLVSLLRHDRLLEL
TRLFTLFDKKAGKIVARYQQVFGIKALVERITSFDDKGARNGGVIWHTTGSGKSFTMVFL
SKALIWLKELAKCRVVVVTDRVDLEDQLARTFASGGALSDKDKKDAMATTGKRLAEQIGK
GNERIIFSIINKFGTAINLPECYNDSPDIIVLVDEGHRSQNGENNIRMQQALPKAAYIGF
TGTPLLQDDKTENKFGKIIHSYTMQQAVEDGTVTPLLYEERIPDLSTNDKAIDAWFDRIT
DTLSEKQRADLKRKFAQKGQIYQTEGRLELIAHDISDHFQNFKQQGLKGQLACDSKASAI
RYKKLLDQIGKVTSVVAMSPPDTREGHDNVDNESTDLVQNWWKENVAQKGWSDEKAYTKH
IIAEFEKDEGPDIMIVVDKLLTGFDEPKNTVLYIDKPLKQHNLIQAIARVNRLHSKKQFG
YLIDYRGILKELDTTIEKYQDLAERTQGGFDIDDLKGLYNRMDTEYKKLPGLYDDLWAIF
SGVKNKQDGQALRQALAPKIENIDGQLTDTNLKLRNDFYDALTAFANCLKVALQSATYFE
DKSFDNKRDLYKITLKSMSQLRQQVRADAEETVDYDEYSENIRSMLDKHIAGVSIEEPEG
AYLVGNMGKDAKPEQMTDDEAKNKKDVITGRVTKMIEQDLADDPYAQEYFSNLLKQAIEK
TKEMFDSPVKQYLLFADFEQQVKDRDVAGLPTDRFAELDPKIKRHVQAYYGLFLKVLGEP
SPLTEDQCFKYALDIDGIVRKAVAEFSINPSEIENQIRLGLLPLLFNDVGIDKAQAIITD
VIQITRLGLSGH
NT seq 3279 nt   +upstreamnt  +downstreamnt
atgaataactctaatcatctgcctaacttcaaagaagaacaaagcgcaaaaatccctgca
ctaactttgcttactaaccttggctatcaattcatttcgccgagtgaatgtatggcaatg
cgtggcaacaaaaccacggtgattttgccgcaggttttgcgcaaagtattgagctttaaa
acctattcattcatgggtaaagagcgtcatttatcgcaagctgcgattgataaaatcgta
caagagcttgccaatcctgcgatgaatgaagggctaaaagcggccaatgaaaagctctat
aacgcgttaacctacggcattagcgtgactgagtttgtcgagggtaaaaaagccaaccca
accattcaaatcattgattgggacacgcctgaaaacaaccaatttcatttcaccgaagag
atggaagttgataacgcccgtagtacaggtaaacgcattcctgacgtggtctgtttcgtt
aatggcttgccttgggtggtgatagaagcaaaacgccctgacagcagcatcaatggtaaa
cccaccatcaccgaaggtatttcgcaaaacatccgcaaccaaaaagtggatgaaattccg
catctgtttgcttacagccaactgttgttgtccatcaatggacatgatggcttatacggt
acgtgcggcacacctgagaagttctgggcgaaatggaaagaagaagacatcaccgaaagc
acctttgaacgcattaagaacaccccactgaatgacgcgcaactgaatgcgattttcagc
catcgcacgccagcgatcaaagatgaatatctatcactgattgcaggcggtgatttggtg
gtgacagaccaagatcgcttattggtatccttactgcgccatgaccgcctactagagcta
acccgtttattcacattgtttgacaaaaaagcaggcaagattgttgcgcgttatcagcaa
gtgtttggcattaaagccttagtggagcgcatcacctcttttgatgacaaaggcgcacgt
aatggcggtgtgatctggcataccacaggttcaggcaaatcattcacgatggtgtttttg
tcaaaagcactgatttggctaaaagagttagcgaaatgccgtgttgtggttgtgactgac
cgtgtcgatttagaagatcagcttgctcgcacctttgcctctggcggcgcactgtcagat
aaagacaaaaaagatgcaatggcaactacaggtaaacgccttgccgagcaaattggtaaa
ggcaatgaacgtataatcttctcgatcatcaacaagtttggtacggcgattaacctacca
gaatgctacaacgatagtccagacattatcgtattagtggatgagggacaccgtagccaa
aacggtgaaaacaatatccgaatgcaacaagccttgccaaaagcggcttacatcggcttc
acaggtacacccctactgcaagacgataaaaccgagaacaagttcggtaagatcattcac
tcttacaccatgcagcaagccgttgaagatggcacggtgacccctctgttatacgaagag
cgtattcctgatctcagcaccaacgacaaagccattgatgcatggtttgaccgtattacc
gataccctatcggaaaagcaacgcgctgacttaaagcgcaagttcgctcaaaaaggtcag
atctaccaaaccgaaggtcgcttagagttaatcgcgcacgatatttctgatcacttccag
aacttcaagcagcaaggtttgaaaggacaacttgcttgcgactctaaagcctctgcgatc
cgctataagaagcttctcgaccaaatcggtaaagtcacttcagtggttgcgatgtcacca
cccgatacccgtgagggacacgataacgtcgataatgaaagtaccgatctggtccaaaat
tggtggaaagagaacgtcgcacagaaaggctggagcgatgaaaaagcctacaccaaacac
atcattgcagaatttgaaaaggatgaaggtcccgacattatgattgtggtcgataagctt
ttaactggcttcgatgaacctaagaacacagtattgtatatcgacaaaccgttaaagcag
cacaacctaatccaagcaattgcacgtgttaaccgcctacacagtaaaaagcagtttggt
tatttgattgactatcgaggcatcctcaaagagttggataccaccattgaaaagtaccaa
gacttagctgagcgcacccagggcggctttgatatcgatgatctcaaaggtttatataac
cgcatggataccgagtacaagaagttgccaggtttgtatgatgacctatgggcaattttt
tctggtgtgaagaacaagcaagatggacaagcacttcgtcaggctttggcacctaaaatt
gaaaatattgacggtcaactgactgataccaacttgaagttgcgtaatgatttttatgat
gcgctgacagcgtttgctaactgcttaaaagtcgcattgcaatcggctacgtattttgaa
gataagagtttcgacaataagcgagacctttacaagatcacgctgaaatccatgagtcaa
ctgcgccaacaagtacgcgctgatgcagaggaaaccgtggactatgacgagtattcggaa
aatattcgctccatgttagacaagcacattgcaggcgtgtcgattgaagagccagaaggc
gcttatctggttggtaatatgggcaaagatgccaaaccagagcaaatgaccgatgatgaa
gccaaaaacaaaaaggatgtcatcacaggtcgtgtgaccaagatgattgagcaagattta
gcggatgacccgtatgcccaagagtatttctcaaacttgttaaagcaagccatcgagaaa
accaaggagatgtttgatagccctgttaaacagtatcttctatttgcggatttcgagcag
caggtcaaagaccgtgatgtagcaggattgccgacggatcgctttgcagagcttgaccct
aaaatcaaacgtcacgttcaagcctactatggtctgttcctaaaagtgctaggtgaacca
tcaccgctaacggaagatcaatgctttaagtatgccttagacattgatggcattgtgcgt
aaagcggttgccgagttttcaattaacccatcggagattgaaaaccaaattcgtttagga
ctgctgccactgctgtttaatgatgtgggtatcgataaagcgcaagctattattacggat
gttattcagatcacccgtcttggcttatcaggtcactaa

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