Photobacterium sp. CCB-ST2H9: L4174_001770
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Entry
L4174_001770 CDS
T10200
Symbol
rng
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phot03019
]
L4174_001770 (rng)
03009 Ribosome biogenesis [BR:
phot03009
]
L4174_001770 (rng)
Messenger RNA biogenesis [BR:
phot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L4174_001770 (rng)
Ribosome biogenesis [BR:
phot03009
]
Prokaryotic type
rRNA processing factors
L4174_001770 (rng)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF7351
Motif
Other DBs
NCBI-ProteinID:
UTM57653
LinkDB
All DBs
Position
1:387323..388792
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AA seq
489 aa
AA seq
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MSTELLINVTPSETRVAMIEGGNLQEIHIERESKRGIVGNIYKGKVSRVLPGMQAAFVDI
GLDKAAFLHASDIVPHTECVAENEKQQFQVRDISELVRQGQDLVVQVVKDPLGTKGARLT
TDVTLPSRYLVFMPGASHVGVSQRIESETERERLKALVMPHCDELGGFIIRTAAEGATTE
EMAQDAAFLKHLWRKVLERRRKYKSKSMLYGELGLAQRILRDFVGTELDSIYVDSRLAFE
NLMEFTDEFVPEISSKLVHYTGEQPIFDLYDTENEIQRALDRKVELKSGGYLIIDQTEAM
TTIDINTGAFVGRRNLEETIFNTNIEATKAIARQLRLRNLGGIIIIDFIDMASEEHRRRV
LTALEHALSYDRVKTNINGFTQLGLVEMTRKRTRESIEHVLCGTCPTCEGRGTVKTVDSV
CYEILREITRVNRAYDADRFVVYVSPAVAETLAGEEYHALAELEVFIGKQVEVKIEPLYN
QEQFDVVMM
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgagctgctgatcaatgtgacacccagtgaaacccgtgtggccatgatcgag
gggggaaacctccaggaaattcatattgagcgtgaatcgaagcgtggcattgtcggtaat
atttacaaaggcaaggtcagtcgggttctgccgggcatgcaggccgcttttgtggatatc
ggtctggataaagccgcgtttttacatgcatccgatattgtgccgcatactgagtgtgtc
gcggaaaatgaaaaacagcagtttcaggtgcgggatatttcagagctggtccgtcagggg
caggatctggtggtgcaggtagtgaaagatccgctggggactaaaggtgcccggctgacc
acagatgtcactctgccgtcacgctatctggtgtttatgccgggagccagccatgtcggt
gtctcacagcgaattgaaagtgaaactgaacgtgagcggctcaaagcgctggtcatgccg
cattgtgacgagttgggcggatttatcatccggactgcggcagagggtgcgacgactgaa
gaaatggctcaggatgcggcattcctgaaacatttgtggcgaaaagtactggaacgtcgc
agaaagtataaaagtaagtccatgctgtacggcgaactgggattagcccagcgtatattg
cgggattttgtcgggacggagctggactccatttatgtcgattcccgcctcgcttttgaa
aatttaatggaatttaccgacgagttcgtgccagaaatcagcagtaaactggtgcattac
accggcgagcagcccatttttgatttgtacgataccgagaatgaaattcagcgcgcactg
gatcgtaaagttgagctgaaatcgggcggatatctgatcattgatcagacggaagccatg
accacgatcgatattaataccggtgcatttgttggtcgccgtaatctggaagaaacgatc
ttcaacaccaacatcgaggcgaccaaagccattgcccgtcagctgcgtttgcgaaattta
gggggcattatcattatcgatttcatcgatatggcctcggaagaacatcgccgcagggta
ctgactgcactggagcacgccctgtcttatgacagagtgaaaaccaatattaatggcttt
acgcaactggggctggttgaaatgacccggaagcgtacccgggaaagtattgaacatgta
ctgtgcgggacttgtccaacttgtgaaggtcgcggcacggtgaaaacggtcgacagtgtc
tgctatgagatcctgcgtgaaattacccgggtaaaccgggcgtatgatgccgaccgtttt
gtggtttatgtctcgcctgctgtggccgaaaccctggccggagaggaataccatgcgctg
gccgaactggaagtctttatcggcaaacaggtcgaagtgaaaattgagcctttgtataac
caagaacaatttgatgttgtcatgatgtaa
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