Photobacterium sp. CCB-ST2H9: L4174_002140
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Entry
L4174_002140 CDS
T10200
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot00010
Glycolysis / Gluconeogenesis
phot00020
Citrate cycle (TCA cycle)
phot00260
Glycine, serine and threonine metabolism
phot00280
Valine, leucine and isoleucine degradation
phot00310
Lysine degradation
phot00380
Tryptophan metabolism
phot00620
Pyruvate metabolism
phot00630
Glyoxylate and dicarboxylate metabolism
phot00640
Propanoate metabolism
phot00670
One carbon pool by folate
phot00785
Lipoic acid metabolism
phot01100
Metabolic pathways
phot01110
Biosynthesis of secondary metabolites
phot01120
Microbial metabolism in diverse environments
phot01200
Carbon metabolism
phot01210
2-Oxocarboxylic acid metabolism
phot01240
Biosynthesis of cofactors
Module
phot_M00009
Citrate cycle (TCA cycle, Krebs cycle)
phot_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
phot_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
phot_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
phot_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
L4174_002140 (lpdA)
00020 Citrate cycle (TCA cycle)
L4174_002140 (lpdA)
00620 Pyruvate metabolism
L4174_002140 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
L4174_002140 (lpdA)
00640 Propanoate metabolism
L4174_002140 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
L4174_002140 (lpdA)
00280 Valine, leucine and isoleucine degradation
L4174_002140 (lpdA)
00310 Lysine degradation
L4174_002140 (lpdA)
00380 Tryptophan metabolism
L4174_002140 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
L4174_002140 (lpdA)
00670 One carbon pool by folate
L4174_002140 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phot04147
]
L4174_002140 (lpdA)
Enzymes [BR:
phot01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
L4174_002140 (lpdA)
Exosome [BR:
phot04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
L4174_002140 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
FAD_binding_2
HI0933_like
NAD_binding_8
AlaDh_PNT_C
Thi4
FAD_binding_3
DAO
Motif
Other DBs
NCBI-ProteinID:
UTM57722
LinkDB
All DBs
Position
1:464623..466047
Genome browser
AA seq
474 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLIEKYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAMAEHGVVFGEPQTDINKIRIWKEKVINQLTGGLGGMAKMRKVTVVNGYGKFT
GPNTIVVEGEETTTVNFDNAIIAAGSRPIELPFIPHEDPRIWDSTDALELKEVPEKLLVM
GGGIIGLEMGTVYDALGSQIDVVEMFDQVIPAADKDIIKVFTKRISKKFNLMLETKVTAV
EAKEDGIYVSMEGKKAPAEPVRYDAVLVAIGRTPNGKLIDAEKAGVAVDERGFINTDKQM
RTNVPHIFAIGDVVGQPMLAHKGVHEGHVAAEVIAGKKHYFDPKVIPSIAYTEPEVAWVG
KTEKEAKAEGINYEVATFPWAASGRAIASDCADGMTKMIFDKDTNRVIGGAIVGTNGGEL
LGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNAKAKKKK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagaaattaaagcccaggtcgtagttctaggctcaggtcctgccggttactct
gccgctttccgttgcgcagacttaggtctggaaacggttctgattgaaaaatacagcact
ctgggtggcgtgtgtctgaacgtgggttgtatcccatcgaaagcactgctgcacgtggcg
aaagtcatcgaagaagcgaaagccatggccgagcacggcgtggtcttcggtgagccgcaa
accgatatcaacaagatccgcatctggaaagaaaaagtcatcaaccagctgactggcggt
ctgggtggtatggcgaaaatgcgtaaagtaacggttgtgaacggttacggtaaatttacc
ggcccgaacaccatcgttgttgaaggcgaagaaaccaccacagtgaacttcgataacgcg
attatcgctgcgggttctcgtccgatcgaactgccatttatcccgcatgaagacccacgt
atctgggattctactgatgcgctggaactgaaagaagttcctgaaaaactgctggtgatg
ggcggcggtatcatcggtctggaaatgggtaccgtgtatgacgcactgggctctcagatc
gatgtggttgaaatgtttgaccaggtgatccctgcggcagacaaagacatcatcaaagtc
ttcaccaagcgtatcagcaagaagttcaacctgatgctggaaaccaaagtgactgcggtt
gaagcgaaggaagacggtatctacgtatcaatggaaggcaagaaagcacctgctgagcct
gttcgttatgatgcggttctggttgcgatcggccgtacaccaaacggtaagctgatcgac
gctgagaaagctggcgttgccgttgatgagcgtggcttcatcaacactgacaagcaaatg
cgtaccaacgtcccacacatcttcgcgattggtgacgttgtgggtcagccaatgctggcg
cacaaaggtgttcacgaaggtcacgtggctgcagaagtcattgccggtaagaaacactac
ttcgatccgaaagtgattccttcaattgcttacactgagccagaagtggcttgggttggt
aagactgagaaagaagcgaaagcagaaggcatcaactacgaagttgcaaccttcccatgg
gcagcctctggccgtgcgattgcttctgactgtgccgacggtatgacgaagatgatcttc
gacaaagacaccaaccgcgtgatcggtggtgcaattgtgggtaccaacggtggtgagctg
ctgggcgaaatcggtctggcgatcgagatgggctgtgatgctgaagatatcgcgctgacc
atccacgcgcacccgacgctgcatgagtctgtgggtctggctgctgaagtgttcgaaggt
tcgatcactgacctgccaaacgcaaaagcgaagaagaaaaagtaa
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