Photobacterium sp. CCB-ST2H9: L4174_004085
Help
Entry
L4174_004085 CDS
T10200
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot00300
Lysine biosynthesis
phot01100
Metabolic pathways
phot01120
Microbial metabolism in diverse environments
phot01230
Biosynthesis of amino acids
Module
phot_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
L4174_004085 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
phot01002
]
L4174_004085 (dapE)
Enzymes [BR:
phot01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
L4174_004085 (dapE)
Peptidases and inhibitors [BR:
phot01002
]
Metallo peptidases
Family M20
L4174_004085 (dapE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M18
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
UTM58035
LinkDB
All DBs
Position
1:complement(846661..847794)
Genome browser
AA seq
377 aa
AA seq
DB search
MSDSPVIALTKDLISRASVTPEDEGCQDVMIARLEKLGFQIETMVFEDTTNLWARRGTEA
PLFVFAGHTDVVPAGPAEQWHTPPFEPTIIDGYLHGRGAADMKGSLACMIVSIERFLAEH
PDHQGSIALLITSDEEGPFINGTTRVVDTLEARNEKIDMCIVGEPSSTHEVGDVVKNGRR
GSITGDLVVKGVQGHVAYPHLADNPVHRAMPALAELATTVWDHGNDYFPPTSFQIANMAA
GTGASNVIPGELKVQFNLRFSTELTNEDIQRKIHSVLDAHGLEYDLAWTFNGQPFLTDKG
TLLEAVVRAIEEVNHQRPELLTTGGTSDGRFIARTGAQVVELGPVNATIHKVNECVKIAD
LEKLTDMYQKVLENTLV
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcccagtgatcgccctgaccaaagaccttatcagccgagcctcagtcacc
ccggaagacgaagggtgtcaggatgtcatgatcgcccgactggaaaaactgggctttcag
atagagaccatggtgtttgaagacaccaccaacctctgggctcgccggggtacagaagcc
ccgctgtttgtctttgccggtcatactgacgtcgttcctgccggtccggctgaacagtgg
catacaccgccttttgaacccaccattatcgacggttatctgcacggccgcggtgctgcg
gatatgaaaggctcactggcctgtatgatcgtatcgattgaacgttttctggccgagcac
cctgaccatcagggctccattgcgttgctgatcacttccgacgaagaagggccgtttatc
aacggaaccacccgtgttgttgatacccttgaagcccgcaacgaaaaaatcgacatgtgt
attgtcggtgaaccgtccagtacccatgaagtgggtgatgtggtgaaaaatggccgccgc
ggttcaatcaccggtgatctcgtcgtgaaaggtgttcaagggcatgttgcctacccgcac
ctggctgacaacccggttcacagagctatgcctgcgctggcagaactggcaaccacagtc
tgggatcacggcaacgattattttccgccaacaagtttccagattgccaatatggcagca
ggcaccggcgcatccaatgtaatccccggagaactcaaggttcagtttaacctgcgtttc
agcacggagctgaccaacgaagacatccagcgcaaaatacactccgtactggatgctcat
ggtctggaatatgatctggcctggaccttcaacggccagccgttcctgacggacaagggc
accctgctggaagctgtcgtccgtgcgattgaagaagtgaaccatcagcgtccggagctg
ctgaccaccggcggcacctctgatggccgtttcattgcccgcaccggtgcgcaggtggtt
gaactgggtcctgtgaacgcgaccattcacaaggtcaacgaatgcgtgaagattgccgat
ctggaaaaattgaccgacatgtaccagaaagtactggaaaacacgctggtatga
DBGET
integrated database retrieval system
