Photobacterium sp. CCB-ST2H9: L4174_007310
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Entry
L4174_007310 CDS
T10200
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot02020
Two-component system
phot02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
L4174_007310
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
L4174_007310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
phot02022
]
L4174_007310
02035 Bacterial motility proteins [BR:
phot02035
]
L4174_007310
Two-component system [BR:
phot02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
L4174_007310
Bacterial motility proteins [BR:
phot02035
]
Flagellar system
Flagellar assembly proteins
Others
L4174_007310
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA
AAA_16
MCM
Mg_chelatase
AAA_2
bpMoxR
AAA_3
AAA_7
AAA_22
HTH_30
HTH_11
AAA_19
nSTAND3
AmiR_N
TIP49
Motif
Other DBs
NCBI-ProteinID:
UTM58633
LinkDB
All DBs
Position
1:1527330..1528694
Genome browser
AA seq
454 aa
AA seq
DB search
MLTKTIQLIEPDRQQAQQVIQVLEQAGYQVDYLTSGKAGLQSHRAAITLVSSALPDMALT
EWVRFSQTVADPQQRRIAIAIVDQHEGLLAAEAMKAGATDYLLKPFEPAQLLSLIARVEA
LQKPMSDIVAESWRSKQILQLAHRAACTHASVLITGESGTGKEVLARYVHQQSPRSKMPF
VAVNCAAIPESMLEAVLFGHVKGAFTGATGSQSGKFEEANGGTILLDEIAEMSPALQAKL
LRVLQEREVERVGSHKTIKLDIRVIAATNKDLRLAVQDGTFREDLYYRLDVLPLHWPPLR
ERPEDILPLANFFISKYQQGSACQMSSDAQQMMLQYHWPGNIRELENIIQRALVMRHGDF
ITAQDLMLPVDTSKVQAIKPEYMPVAPVAMGTEQGHIGAKKQAEFQYVLDVLKQHEGNRT
MTAKALGVTTRALRYKLAAMREQGIDISQIGSAA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttaacgaaaacgattcagctcattgaaccggacaggcagcaggctcagcaagttata
caggtgctggagcaggctggttatcaggtagattatctgacttccggcaaagccggtttg
caatctcaccgtgctgctatcactctggtcagctccgctttaccagatatggcattgacc
gagtgggttcgcttcagccagaccgttgctgatcctcagcagcgccggattgccatcgca
attgttgatcagcatgaaggcttgctggctgctgaagccatgaaagccggtgcgacagat
tatcttctgaaaccttttgaacctgcacaattgctgagtctgatcgcccgcgttgaagct
ttacagaaacccatgtcagacattgtggcggagtcctggcgcagtaaacagattctgcaa
ctggctcaccgcgcagcctgcacccatgccagtgttctgattaccggagaatccggtaca
gggaaagaagtgctggctcgttacgttcatcagcagtcaccgcgcagcaaaatgcctttt
gttgcggtgaactgtgcagccattcctgaatctatgcttgaagcggtgttgttcggtcat
gtgaaaggcgcatttaccggtgcgaccggcagtcagagcggtaagtttgaagaagcaaac
ggcggcaccattctgctggatgaaattgcagaaatgtctcctgcgcttcaggccaaactc
ctgcgggtactgcaggaacgtgaagttgaacgggtcggcagccataagacaatcaagctg
gatatccgggtgattgctgcaaccaataaagacctgcgtctggccgttcaggatggcact
ttccgtgaagacctttactaccgtctggatgtattgccgctccactggccgccgctgcgt
gaacgtcctgaagatattcttcctttagcaaatttctttatcagtaaatatcagcagggc
agtgcctgtcagatgtcatcagatgcgcagcaaatgatgttgcagtaccactggcccggc
aatattcgtgaactggaaaacattattcagcgtgcactggtaatgcggcacggtgatttc
atcacagctcaggatctgatgctgcctgtcgacaccagcaaggttcaggctattaaacct
gaatacatgccggttgcgccagtcgcgatggggactgagcaagggcatattggtgcaaaa
aaacaggctgaatttcagtatgtgctcgatgtactgaaacagcatgaaggcaacagaacc
atgacagcaaaagcactgggtgtaacgacccgggcactgcgatacaaattagcggcaatg
cgtgagcaaggcattgatatttcacaaattggctcagcagcataa
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