Photobacterium sp. CCB-ST2H9: L4174_009200
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Entry
L4174_009200 CDS
T10200
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot03420
Nucleotide excision repair
phot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L4174_009200
03430 Mismatch repair
L4174_009200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_009200
Enzymes [BR:
phot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L4174_009200
DNA repair and recombination proteins [BR:
phot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L4174_009200
MMR (mismatch excision repair)
Other MMR factors
L4174_009200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
AAA_22
ResIII
PhoH
AAA_34
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UTM58924
LinkDB
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Position
1:complement(1979262..1981583)
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AA seq
773 aa
AA seq
DB search
MHFTSEQQRFIQHEEGNALCIAGAGTGKTTTLVGLIQSQLLKRPAQEMLVLMFNSDIRRD
FQRKLAQAGVEQPVPVHTFHSFCLSVLNQSGYLAESGFRVDFNPGENDKSLAKQVLRQMA
GKETAYSKQQQLKEPKTLELLLSFVGLVKAHMLPPAEVFAMAGINSDYRFILQAFQAFEH
LRQAQRLLFFDDWLVTVVGLLEQNISLRARYQHQCRLLVVDEFQDINNAQYRLLKLLLGD
GCQLVAVGDVDQCIYTWRGSAPQFMLNFERDFAPATVYTLSQTFRFGHSLALAASHLIAH
NQARFSDFLTVPSEAVSDTQVSLTGSPRQVGEIVTAIQTHLEQGGKPGDVAILVRRWSQT
LLFELAFLSKQIPYQMPVPSVLANSREVRLLMEVMQLAVGRFEQMADQDRSTLMFSLMSF
PHCYVPNKELKPLCDQLAKMNSKAWTGFAERHGQANPNLKLDNLIERLDLLGRLQRKGSQ
KAFDVFEQYRRESGLDSWIWKTEATASEIEEAIDRLDAVSTVLETMDQRCEKALQYFEFY
SAQSRQVSTERSAQPAQSESIQVTTIFRAKGCEYDRVYLPFWDKDAFPYRNPAATDMKTD
QEEERRLAYVALTRAKDFAAVYYTDTEKKGKRNASAFVREAAIELAGSIGPLLYQAGDLP
AAGTPVTEKYYARVGRTEDVPAPKQPEQARSDTSRVAVNPGIAGYSYRWAIEQPLPENAE
KVIRSLVRTKNARYLDTEITRLLRELEKAQSGKQSVLEKRLIAVAHARRQALR
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcattttacttctgaacagcagcgttttattcagcatgaagaaggaaatgccttatgt
attgccggtgcaggcacaggtaaaacaacgacgctggttggcctgattcagtcacagctt
ctcaagcggccagcccaggaaatgctggtgctgatgttcaacagtgatatccggcgtgac
tttcagcggaagctggcgcaggcgggtgttgaacagcctgtgcccgtgcatacctttcac
agtttttgtctgagtgtgctgaaccagtccggttatctggcggaatcgggcttcagagtc
gatttcaacccgggtgaaaacgataaaagtctggcaaagcaggtgctgcgacaaatggcc
ggcaaagaaacggcttacagcaagcagcagcaactgaaagagccgaaaacgctggaattg
ctgctgagttttgtggggctggtgaaagcgcatatgctgccaccggctgaagtctttgcg
atggccggaattaacagcgattaccgttttattctgcaggcttttcaggcctttgagcat
ttacggcaggcacagcggttgctgttttttgacgattggctggtcaccgtggttggtctg
ctggaacaaaatatcagcctgagggcgcgttatcagcatcagtgtcggcttttggttgtg
gatgaatttcaggacatcaacaatgcacagtaccgcctgctgaaactgttactcggggac
ggctgccagctggtggctgtcggcgatgtggatcagtgtatttacacctggcggggcagt
gcgcctcagtttatgctcaactttgagcgggacttcgcacctgcgactgtctataccctg
tctcagacctttcgtttcgggcacagtctggccttggctgccagtcatttgattgcacat
aaccaggcccgtttttctgattttctgacggttccttcggaggctgtgtcagatacgcag
gtcagcctgactggttcgccacgtcaggtcggagaaattgtgaccgcaatacagacacac
cttgagcaaggcggcaagccgggcgatgtggcgattctggtccggcgctggtcccagacg
ttgctgtttgaactggcgtttctcagcaaacaaattccataccagatgccagtgccgtct
gtcctggccaacagcagggaagtccggttgctgatggaagtcatgcagcttgctgtggga
cgttttgaacagatggctgatcaggatcgttcgacgctgatgttcagtctgatgtcgttt
ccgcattgttatgtgccgaataaggaactgaaaccgctgtgtgaccagctggcgaaaatg
aacagcaaggcctggaccgggtttgcagaacgtcatggtcaagcgaacccgaatctcaaa
ctggacaatctgattgagcggctggatttactggggcgtctgcaacgcaaaggtagccag
aaggcgtttgacgtttttgagcagtatcgccgggaaagcgggctggacagctggatatgg
aaaacagaagcaacagccagtgaaatcgaagaagcgattgaccggctggatgcggtttca
accgtactggaaacgatggaccaacggtgtgaaaaagcgctgcaatatttcgaattttat
tcggctcagtccagacaggtcagtacggagcgaagcgcacagccagcgcaatccgaaagt
atccaggtgaccacaattttccgggcaaaaggatgtgagtatgaccgggtctatctgccg
ttttgggataaagatgcgttcccttaccgtaaccccgcggcgacagacatgaaaacagat
caggaagaagagcgacgtctcgcttatgtggcactgacccgtgcgaaagattttgccgct
gtgtattacacagatacagaaaaaaaagggaagcgcaatgccagcgcttttgtcagagaa
gcggcgatcgaactggccggaagcatcgggccgttgttataccaagccggagatttacct
gcagccgggacgccagtgacagaaaaatattatgcgagggtggggcggacagaagatgtg
cctgctccgaaacagccagagcaagcccggagtgataccagccgggttgcggtgaacccg
ggtatcgccggatacagttatcgctgggcgattgaacagccgttaccggagaatgctgaa
aaagtgattcgttcactggtcagaacgaaaaatgcccgatatctggacactgaaatcacc
cgtttgctgcgagaactggaaaaagcgcagtccggtaagcaatctgtgctcgaaaaacgc
ctcattgctgtggcgcatgcgcgtcgtcaggcgcttcgctga
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integrated database retrieval system
