Photobacterium sp. CCB-ST2H9: L4174_010045
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Entry
L4174_010045 CDS
T10200
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
phot03000
]
L4174_010045
Transcription factors [BR:
phot03000
]
Prokaryotic type
Helix-turn-helix
Other families
L4174_010045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
GAF
HTH_8
HTH_30
AAA_5
AAA_2
PAS_4
Mg_chelatase
AAA
HTH_1
nSTAND6
HTH_28
HTH_7
MCM
AAA_3
HTH_23
AAA_16
HTH_50
PAS
DUF2089
HTH_20
HTH_17
HTH_22
RsmI_C
PAS_8
PAS_9
RWP-RK
ANT
ANAPC1
Phage-MuB_C
NACHT
HTH_29
Motif
Other DBs
NCBI-ProteinID:
UTM56189
LinkDB
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Position
1:complement(2145965..2147752)
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AA seq
595 aa
AA seq
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MPTLASRDPADWLSESWHRCQIAGLRESQLPENIRLEHTQLDERRSDAADLIAAVEHKAV
PLFNQVFAGTNSRLLLGDTEGVIIKSWGQSRFEQRLTGIALESGVCWQERLKGTNAIGNA
LTEKQFITVVGDQHFIRQHRFISCSAGPVFSPSGELIGVLDITSEQQVHSDQTRLFVQHM
VQQVENMLLCQLPEASIRIDLACDQTLLHTGWQGILVANEQGKILAYNSVAERLLGQRPV
LGRDIDALVASRRSTRHALPLVFQRKMMKPAQKKNSISSRQLWSPACPLHHGDDRVELAW
QQACKLIDKDVNLLVLGETGVGKGEFVKQLHQHSARRHAPLVSVNCGALPQNLIESELFG
YVPGAFTGASRQGQQGRIRQADQGILFLDEIAELPLSAQTRLLHVLQEKEVMPVGATQSV
KVDIRIIAATHKDLAQAVSEGQFREDLYYRLNGLILCLPPLRERQDKAELIEAILLQYSD
ATLQICSELSDRLAGYHWPGNIRELDNMLKVAAALAEGDSILTLAHLPQHFAAQLPAATS
AGQISKGVKKLEATISGTLLETYQANHGNISRTAKILGISRNTLYRRLRKLGIQV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccgacacttgcaagccgggatcccgccgactggctgtccgaatcatggcaccgatgc
cagattgccgggctgagagagagccagctgcctgaaaatatccgtctggaacacacccag
ctggatgagcgtcgctcagatgctgctgatttgattgcagccgtcgaacataaggcggtg
ccattgttcaatcaggtttttgccggaaccaacagccggttgctgctgggcgacaccgaa
ggggtgattatcaagtcctggggacagtcccgattcgagcagcgattaaccggcattgcg
cttgagtccggtgtgtgctggcaagagcggttgaaagggacgaatgccatcggcaatgca
ctcaccgaaaaacagttcattactgtggtcggtgatcagcatttcattcgccagcaccgt
tttatcagttgctcggcagggccggttttcagtccgtctggtgagctgattggggtgctg
gatattaccagcgaacagcaggtgcactccgaccagacccggctgtttgttcagcatatg
gtgcaacaagtggaaaatatgttgttgtgtcagttgccggaagccagcatacgcattgat
ctggcgtgcgatcagactttgttgcacaccggctggcagggcattctggtggccaatgaa
caagggaagattctggcttataacagtgttgccgagcgcttgctgggtcaacgtcctgtg
ctgggccgtgatattgatgcgctggtggcgtcccggcggagtacccggcatgccctgcca
ctggtttttcagcggaaaatgatgaaaccggcacagaaaaaaaacagcatctcatctcgt
cagttatggtcaccggcctgcccgttgcatcatggtgatgaccgggttgaactggcctgg
cagcaagcctgtaaactgattgataaagacgttaacttgttggtgctgggtgaaaccggt
gtcgggaaaggggagttcgtcaaacagctccatcagcacagtgccagacggcatgcccct
ctagtttccgtgaactgtggcgcgctgccgcaaaatctgattgagtctgagttgtttggg
tatgtgccaggcgcttttaccggtgccagccgacaggggcagcaaggacggatccgacag
gcggatcaggggattttgtttctggatgaaattgctgaattgccattatccgcccaaacc
cgcctgctgcatgttttgcaggaaaaagaagtgatgccagtgggggcaacccagtctgtg
aaagtggacatccggattattgccgcgacccataaagacctggcccaagcggtttcagaa
gggcagtttcgggaagatttgtattaccggctcaatggcttgattctctgtttaccgcca
ttgcgggagcggcaggacaaagccgaactgatcgaggcgattttgctgcaatacagtgat
gcgaccttgcagatttgctctgagttatcagaccggctggccggatatcactggcccggg
aatattcgagaactggacaatatgctgaaagtggccgcagcactggcagaaggcgactct
atactgacgctggcacatttgccgcagcatttcgcggctcagttaccggctgcaactagt
gcgggtcagatcagcaaaggtgtgaaaaaactggaagcgaccatttccgggacgctgctg
gaaacctatcaggccaatcacggtaatatttcccggactgcaaagatattgggtatcagc
cgcaataccctgtatcgccgtctgcgtaagctgggtattcaggtgtag
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