Photobacterium sp. CCB-ST2H9: L4174_010480
Help
Entry
L4174_010480 CDS
T10200
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phot03032
]
L4174_010480 (ihfB)
03036 Chromosome and associated proteins [BR:
phot03036
]
L4174_010480 (ihfB)
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_010480 (ihfB)
DNA replication proteins [BR:
phot03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
L4174_010480 (ihfB)
Chromosome and associated proteins [BR:
phot03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
L4174_010480 (ihfB)
DNA repair and recombination proteins [BR:
phot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
L4174_010480 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
HAAS
HU-DNA_bdg
Coagulin
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
UTM56267
LinkDB
All DBs
Position
1:complement(2245187..2245477)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKSELIERLCSQQTHLSAKQVEDAIKEILEHMATTLAEGDRIEIRGFGSFSLHYRAPRV
GRNPKTGDKVELDGKYVPHFKPGKELRDRVNTPNAG
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtctgaattgatcgaaaggctctgcagccaacaaacacatctttctgcgaaa
caagtagaagatgcgatcaaggaaatccttgagcatatggccacaacccttgctgaaggg
gaccgtattgaaatccgtggctttggtagtttctctttgcattatcgcgcaccgcgcgtt
ggccgtaatccaaaaactggggataaggtcgagctggacggcaagtacgttcctcacttt
aaaccaggtaaagagttgcgtgatcgcgtgaatacgccgaatgcaggataa
DBGET
integrated database retrieval system
