Photobacterium sp. CCB-ST2H9: L4174_010865
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Entry
L4174_010865 CDS
T10200
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L4174_010865 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_010865 (ruvB)
Enzymes [BR:
phot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L4174_010865 (ruvB)
DNA repair and recombination proteins [BR:
phot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L4174_010865 (ruvB)
RecFOR pathway proteins
L4174_010865 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_3
AAA_22
Rad17
AAA_16
AAA_14
nSTAND3
RNA_helicase
AAA_18
NTPase_1
TIP49
AAA_2
AAA_17
Bac_DnaA
Sigma54_activ_2
MCM
ABC_tran
NB-ARC
AAA_28
AAA_24
bpMoxR
TsaE
NPHP3_N
PilZ-like
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UTM56333
LinkDB
All DBs
Position
1:complement(2335684..2336697)
Genome browser
AA seq
337 aa
AA seq
DB search
MIEADRLVSGNYPLNKEEEVIDRAIRPKLLQDYQGQDHVRSQMEIFIQAAKLRSEALDHL
LIFGPPGLGKTTLANIVANEMGVSIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRL
SPQVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLVGATTRAGSLTSPLRDRFGIT
QRLEYYKVADLQDIVQRSANCLGLSMVTEGALEIARRSRGTPRIANRLLRRVRDYAEVKG
NGHISADIASQALDMLDVDSSGFDYMDRKLLMAIIDKFMGGPVGLDNLAAAIGEERDTIE
DVLEPYLIQQGYLQRTPRGRIATQRAYLHFGLDLPES
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagctgaccgtctggtttccggtaattaccccctgaataaagaagaggaggtg
attgaccgcgccatccgtccgaagctgcttcaggattatcaaggacaggatcatgttcgc
agccagatggagatctttattcaggctgcgaaactgcgttctgaggcgctggaccacctg
ttgatctttggtccgcccgggctgggtaaaacgacgctggcaaacattgtcgcgaatgaa
atgggcgtgagtatccggacgacttccggccctgtgcttgaaaaagcgggggatctggct
gctttgctgaccaaccttgaagaaaatgacgtgctgtttatcgatgagatccaccgcctc
agccctcaggttgaagaagtgctgtatccggcgatggaagattatcagctcgatatcatg
attggtgaaggaccggcagcgcgttccattaagattgatctgcccccttttacgctggtc
ggtgcgaccacaagagcgggttctctgacgtcaccgttgcgggatcgtttcggaatcacc
cagcgtctggaatactacaaagttgctgatttgcaggacattgttcagcgcagtgcgaat
tgtctcggcctgtcgatggtgactgaaggtgcgcttgagatagcacggcgttcccggggc
acaccgcggattgccaaccggcttctgcgtcgggttcgggactatgccgaggtgaaagga
aacggccatatcagtgcggacatcgcaagtcaggcgctggatatgctggatgtcgacagc
agcggctttgattacatggaccgaaagttgctcatggctattatcgataagttcatgggg
ggcccggtgggtctcgataacttggctgccgcgattggtgaagagcgggataccattgaa
gatgtgctggagccttatctgattcagcaggggtatctgcaacgcactccgagagggaga
attgcgacgcagcgcgcttaccttcacttcgggctggatttgcctgagagctga
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