Photobacterium sp. CCB-ST2H9: L4174_012465
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Entry
L4174_012465 CDS
T10200
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phot03009
]
L4174_012465 (der)
Ribosome biogenesis [BR:
phot03009
]
Prokaryotic type
GTPases
L4174_012465 (der)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
KH_dom-like
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
AAA_22
cobW
Roc
Ras
PduV-EutP
SRP54
ATP_bind_1
TniB
ABC_tran
AAA_24
nSTAND3
AAA_16
Nuc_deoxyri_tr2
Guanylate_kin
RHD3_GTPase
SRPRB
Motif
Other DBs
NCBI-ProteinID:
UTM56625
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All DBs
Position
1:complement(2693856..2695361)
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AA seq
501 aa
AA seq
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MIPVVALVGRPNVGKSTLFNRLTRTRDALVADFPGLTRDRKYGRAELEENEFIVIDTGGI
DGSEEGVETKMAEQSLLAIEEADVVLFLVDGRAGLTAADEAIAKHLRSRQKPTFLVVNKI
DGIDADSACADFWQLGVDEMHQIAAAQNRGVTALMERALAPFVEAWKAEHAEDEEFVDIE
SLDSVEAIEKANLTEEDAEAAYKRLQEQPIKLAIIGRPNVGKSTLTNRILGEERVVVYDM
PGTTRDSIYIPMERDGQDYVLIDTAGVRRRKNMNEAVEKFSVIQTLKAVEDANVVLLVID
ARENISDQDLSLLGFALNAGRSLVIAVNKWDGLDNEVKERVKSELDRRLGFVDFARIHFI
SALHGTGVGHLYESVQEAYQSATKRISTSLLTRIMQMAQDDHQPPMIRGRRVKLKYAHAG
GYNPPIVVIHGNQVNDLPGSYKRYLMNYYRKTLEMMGTPIRIQFQNSDNPYGNVKRQKLT
VSQERQRKRLTTALKNRENNQ
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattcctgtagttgcccttgtcgggcgcccgaatgtgggtaaatcgacgttgtttaac
cgtcttactcgcacccgggatgcgctggtcgctgactttcctggcctaaccagggatcgt
aagtacggtcgagctgagctcgaagagaacgaatttattgtcatcgacaccggcggtatc
gacggttcagaagaaggcgttgaaaccaaaatggccgagcagtcgctgctggcgattgaa
gaagcagacgttgtgctgtttctggtggatggccgtgctggtctgacggcggctgatgaa
gccattgccaagcacctgcgcagccggcagaaaccaacgtttctggtggtgaacaagatt
gacggcattgatgccgacagtgcctgtgcagacttctggcaactgggtgttgatgaaatg
caccagattgccgcggcgcagaaccgtggtgtgactgcgctgatggaacgtgcactggct
ccgttcgtggaagcatggaaagcagagcatgccgaagatgaagagttcgttgatattgag
tcactggactctgttgaggcgatcgaaaaagcgaacctgacggaagaagatgctgaggca
gcttacaaacgtctgcaggaacagccaatcaagctggcaattatcggtcgtccgaatgtg
ggtaagtcgaccctgacgaaccggatcctgggtgaagaacgggtggtcgtgtatgacatg
ccgggaaccacacgtgactccatctatatcccaatggagcgtgacggccaggactatgtg
ctgattgatactgcgggtgtgcgtcgccggaagaatatgaacgaggctgttgaaaaattc
tcggtgattcagacgttgaaagccgttgaagatgccaacgttgtcctgctggtcattgat
gcccgtgaaaatatttctgatcaggatctgagcctgttgggctttgccctgaatgccggt
cgttcgctggtgattgcagtgaacaaatgggatggtctggataatgaagtgaaagagcga
gtgaagtctgagctggaccgtcgtctgggctttgttgactttgcccggatccactttatt
tcggcgctgcacggaactggcgttggtcatctgtatgaatccgttcaggaagcttaccag
tctgcgaccaagcgtatcagtacttcgctgctgacccggattatgcaaatggcgcaggat
gatcaccaaccgccaatgattcgtggccgtcgtgtgaagctgaaatatgcgcacgccggt
ggttataacccgccaatcgttgtcattcatggtaaccaggttaatgatcttccgggctct
tacaaacgttacctgatgaactattaccgtaagacactggaaatgatggggacaccaatc
cgcattcagttccagaacagtgataacccatatggtaacgtgaagcgtcagaaactgacg
gtttctcaggagcgtcagcgtaaacgactgacgacagccctgaagaacagggaaaacaat
cagtaa
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