Photobacterium sp. CCB-ST2H9: L4174_013100
Help
Entry
L4174_013100 CDS
T10200
Name
(GenBank) EAL domain-containing protein
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
Enzymes [BR:
phot01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
L4174_013100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS_9
PAS_8
PAS
Motif
Other DBs
NCBI-ProteinID:
UTM58975
LinkDB
All DBs
Position
1:2841378..2843417
Genome browser
AA seq
679 aa
AA seq
DB search
MPTEFINNWFFQLTGNSPFLFAILDKQHCYTAVNHHYSQLSGLNHEELVGCTDADILGHA
FYETLKPYYERAFKGESVEGDVILDEHRHHTSLHFSLSPLRTDTAEITHVVLHAIDTSER
LQLANAVAEREEQFNQLCRLMADGCLLIEKNQILSANAIAAQLLGFSSAEAMIGEDLGQL
LIDSRNNRPFGEQLAELSNGKTYHCLTSPQCQTENALTLTLGDVQLVGSPASLVVLKQPH
KQQVHPDQVEQLIHTDPLTGLYNRHGFSRRLEQMINRQIPLVMLYLDIDNFKNINDSLGH
HIGDRVLQEISHRLRQLLPENAVIGHLGGDEFGILLPEPVQADMGEQVSKKIIALVNQPF
DLMHFSKHLACSIGMVNYPGNGSDARLLLQHADTAMYEAKNRGRNRLVTFDETMNKEARM
RLWLEIELQKALQNKGLEVWYQPKVSARDFSIHGAEALVRWKHPIEGYISPAQFIPVAER
SGLIEQLGKVVMREVFTTVKRWKKQGLLPGRVAINLSPQQFGNPNLIQYVSDLQRATEVN
PDDITFELTESAMMGENEHTIQMLNAIKKLGFALSIDDFGTGYSSLSYLARFPLDELKID
RAFIKDLETVPKQLTLIENIINLGKSLNMCVVAEGVETRQQAALLSNLNCDYIQGFHFFR
PLPKNDLETILVKNFRSRY
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccgactgaattcatcaacaattggttttttcaactgacaggcaatagcccgttcctg
ttcgccattctggataagcaacactgctacaccgccgtgaaccatcattacagccagtta
agtggcctcaaccatgaagaactggtgggctgcaccgacgctgacattctgggtcatgct
ttttatgaaacgctgaaaccctattatgaacgtgctttcaaaggtgagagtgtcgagggt
gatgtgattttggatgagcaccgccaccacaccagcctgcacttcagcctgtcgccgctg
agaactgacaccgcagagatcacccatgtcgtcttacatgccatagacacctctgaacgt
ctccagttagccaatgccgtcgctgaacgggaagagcagttcaaccaactgtgccggctc
atggccgacggctgcctgctcattgaaaaaaatcagatcctgtctgccaatgctattgcg
gcacaattactgggtttttcgtccgcagaagccatgattggcgaagatctcggacaattg
ctgatcgacagccgtaacaaccgtccttttggcgaacagctggctgaattaagtaatggc
aaaacgtaccactgtctgaccagcccgcaatgccagacagaaaatgcactgaccctcaca
ctgggtgatgttcagctggtgggctcccctgccagcctggtcgttctgaagcaaccgcat
aaacagcaggtccatccggatcaggtcgaacaactgattcataccgatccgctgaccgga
ctctacaaccggcatggattcagccggcgtctggagcagatgatcaaccgccagatccct
ctggtgatgctgtatctggatattgataactttaagaacatcaacgattccctgggccac
catatcggcgatcgcgtgcttcaggaaatctctcaccgcctgcgccagctgttgccagag
aacgccgtcatcggccacctgggaggcgatgaattcggcattctgcttccggagccggtt
caggcagatatgggcgaacaagtttcgaagaaaattattgcgctggtcaatcagcccttt
gacctgatgcacttcagcaaacatctggcctgctccatcggtatggtgaattatccgggg
aatggcagcgatgcccgtttgctgcttcagcatgccgatacggccatgtatgaagccaaa
aaccgcgggcggaatcgtctggtcacctttgatgaaaccatgaacaaagaagccagaatg
cgcttatggctggaaatcgagctccagaaagccctgcagaacaaagggctggaagtctgg
tatcagccgaaggtcagtgctcgggatttctccattcatggcgcagaagcactggtccgc
tggaaacatccgatcgaaggctatatcagcccggcccagtttattccggttgctgaacgc
tcggggctgatcgagcaactgggcaaagtggtcatgcgcgaagtcttcactacggttaag
cgatggaagaaacaaggcctgttgcctggccgggtggccatcaacctttcaccgcagcag
ttcgggaatccgaacctgatccagtatgtttccgatttgcagcgcgccactgaagtgaat
ccggacgatatcacctttgaactgactgaaagtgccatgatgggtgaaaatgagcacacc
atccagatgctgaacgcaatcaaaaaacttgggtttgcattatcaattgatgatttcggt
acgggctattcctcgctgtcttatctggcccgctttccgctggacgagctgaaaatcgac
cgtgcttttatcaaagatctggaaaccgtcccgaaacagctgaccctgatcgaaaacatc
atcaacctgggtaagtctctcaacatgtgtgttgtggcagaaggcgttgaaacacgtcag
caggccgcactgctgtctaacctgaactgcgattacattcagggcttccattttttccgc
ccgctgccaaaaaatgatttagaaaccattctggttaaaaattttcgcagccggtactga
DBGET
integrated database retrieval system
