Photobacterium sp. CCB-ST2H9: L4174_013140
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Entry
L4174_013140 CDS
T10200
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
phot03016
]
L4174_013140 (truB)
Enzymes [BR:
phot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
L4174_013140 (truB)
Transfer RNA biogenesis [BR:
phot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
L4174_013140 (truB)
Prokaryotic type
L4174_013140 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
UTM56750
LinkDB
All DBs
Position
1:complement(2852253..2853200)
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AA seq
315 aa
AA seq
DB search
MARRRKGRPVDGVLLLDKPGGITSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTNTSDSDGEVVETREVKVDRGQLERCIAKFRGTTKQ
IPSMFSALKYQGRPLYEYAREGKEVPREARDITVYEISLLRFSDNEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTYLRRIGVSKYPLDKMVTLEQLEALLDEAQSQEIQPKELLDPLL
LPTDSAVQDLPEVNLLPGVASYVLNGQPVQAGRVPETGTLVRLTAGEQRDFIGIGEIDAD
NMVAPKRVLANKPKD
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgtcgtaaagggcgtccggttgatggggtactgctgctggataaacccggc
ggtattacttccaatgacgcgctgcaaaaagtaaaacgcattttctttgcggaaaaagca
ggccataccggtgcgctggatccgctggcgacgggcatgttgccgatttgtctgggggaa
gcgaccaagttttcccagttcctgctggattctgacaagcgttaccgtgtgattgccaaa
ctcggtgagcggaccaacacctccgattcggatggtgaggttgtcgaaacccgtgaggtg
aaagtggaccgcggccagcttgagcgttgcattgcgaagtttcgtggcacgaccaagcag
atcccgtccatgttttcagccctgaaatatcagggacgcccgctgtacgaatatgcccgt
gaagggaaagaagtaccgcgtgaagcccgtgacattaccgtgtatgaaatcagcctgctg
cgcttcagtgacaatgaagttgagatggaagttcattgctccaaagggacttacatccgg
acgattgttgatgatctgggtgaaatgcttggctgtggcgcgcatgtcacttacctgcgt
cgtatcggggtatctaaatatccgctggataaaatggtaacacttgagcagcttgaagcg
ctgcttgatgaagcccagtcgcaggagattcagccgaaagagttgctggatccactgttg
ctgccgacggatagtgcggttcaggatttgcctgaagtaaacttgctgccgggcgtcgcc
agttatgtgctgaatggtcagccggtgcaggcggggcgtgtaccggaaaccggtacgctg
gtccggctgacagcaggtgagcaacgtgattttatcggtatcggtgaaatcgatgcagat
aatatggttgcaccgaagcgggttctggcgaacaaaccgaaagactga
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