Photobacterium sp. CCB-ST2H9: L4174_013240
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Entry
L4174_013240 CDS
T10200
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot00220
Arginine biosynthesis
phot00240
Pyrimidine metabolism
phot00250
Alanine, aspartate and glutamate metabolism
phot01100
Metabolic pathways
phot01110
Biosynthesis of secondary metabolites
phot01240
Biosynthesis of cofactors
Module
phot_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
L4174_013240 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
L4174_013240 (carB)
00220 Arginine biosynthesis
L4174_013240 (carB)
Enzymes [BR:
phot01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
L4174_013240 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
ATP-grasp_3
Dala_Dala_lig_C
ATP-grasp_4
ATPgrasp_Ter
CoA_binding_2
GSH-S_ATP
Motif
Other DBs
NCBI-ProteinID:
UTM56768
LinkDB
All DBs
Position
1:complement(2874076..2877306)
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AA seq
1076 aa
AA seq
DB search
MPKRTDIQSVLILGAGPIVIGQACEFDYSGAQACKALREEGYRVILVNSNPATIMTDPEM
ADATYIEPIHWEVVRKIIEKERPDAILPTMGGQTALNCALALEKHGVLEEFGVEMIGATA
DAIDKAEDRSRFDKAMKSIGLACPRADTAKNMEEAYKVLDMVGFPCIIRPSFTMGGTGGG
IAYNKEEFEEICRRGLDLSPTNELLIDESLIGWKEYEMEVVRDKNDNCIIVCAIENFDPM
GIHTGDSITVAPAQTLTDKEYQLMRNASLAVLREIGVETGGSNVQFGINPKDGRMVIIEM
NPRVSRSSALASKATGFPIAKVAAKLAIGFTLDELMNDITGGATPASFEPTIDYVVTKIP
RFNFEKFAGANDRLTTQMKSVGEVMAIGRNQQESLQKALRGLEVGANGFDEMVDLDDPEA
LTKIRHELKEAGAERIWYIADAFRAGLSVDGVFNLTNIDRWFLVQIEELVKLEAKVKEGG
FAGLTGDFLRQLKRKGFSDARLAKLLGVAELEIRKERDRHNIHPVYKRVDTCAAEFSSDT
AYMYSSYDEECEANPTDRDKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNC
NPETVSTDYDTSDRLYFEPVTLEDVLSIVRVEKPKGVIVQYGGQTPLKLARALEAAGVPI
IGTSPDAIDRAEDRERFQAAVERLGLKQPENATVTTMEQAVEKSKEIGFPLVVRPSYVLG
GRAMEIVYDEADLRRYFNEAVSVSNESPVLLDRFLDDATEVDVDAICDGERVVIGGIMEH
IEQAGVHSGDSACSLPAYTLSQEIQDEMRRQVEKLAFELGVRGLMNTQFAVKDNEVYLIE
VNPRAARTVPFVSKATGAPLAKIAARVMAGQSLEQQGFTKEIIPPYYSVKEVVLPFNKFP
GVDPLLGPEMRSTGEVMGVGDTFAEAFAKAELGCGKEHSRENAGRALLSVRNNDKRRVVD
LAAKLVKLGYELDATHGTAVILGEAGINPRLVNKVHEGRPHILDRIKNNEYSYIINTAEG
RQAIEDSKVLRRGALAEKVNYTTTLNAAFATCMALTADDRHTVTSVQELHARLNQD
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgtactgacatacaaagtgttctgattctgggtgccggtccaatcgtgatt
ggtcaggcctgtgagtttgactactcaggtgctcaggcctgtaaagcgctgcgtgaagaa
ggctaccgcgtcattctggtgaactcgaatccggccaccatcatgaccgatccggaaatg
gcggacgcaacttatattgagccgattcactgggaagttgttcgtaaaatcatcgaaaaa
gaacgtccggacgcgatactgccaaccatgggcggccagactgcactgaactgtgcactg
gcgctggaaaagcatggcgtgctggaagagttcggcgtcgagatgattggtgcgactgct
gatgctatcgacaaagcagaagaccgttcacgctttgataaagcgatgaaatcgattggt
ctggcgtgtccgcgcgcagatacagcgaaaaacatggaagaagcctacaaagtcctcgat
atggtcggcttcccttgtattatccgtccatccttcaccatgggtggtaccggcggtggt
atcgcttataacaaagaagaatttgaagagatctgccgtcgcggtctggatctgtcacca
accaatgagctgctgattgatgagtcgctgattggctggaaagaatacgagatggaagtg
gttcgtgataagaacgacaactgcatcatcgtgtgtgccatcgaaaactttgacccgatg
ggcattcacaccggtgactccatcacggttgcgccggcgcagactctgacggacaaagaa
taccagctgatgcgaaatgcatctctggctgttctgcgcgaaatcggtgtagaaaccggt
ggttccaacgttcagttcgggattaacccgaaagatggccggatggtgatcatcgagatg
aacccgcgtgtttcccgctcgtctgcactggcatctaaagcaaccggcttcccgattgcg
aaagtggcagccaaactggccatcggcttcacgctggatgagctgatgaacgacatcacc
ggtggtgcgacaccggcttcattcgagccgactatcgactacgttgtaacgaagattcct
cgcttcaactttgaaaaatttgccggcgccaacgatcgcctgactacacagatgaagtct
gtgggtgaagtgatggctattggccgtaaccagcaggaatcgctgcaaaaagcactgcgc
ggcctggaagtcggtgccaatggtttcgatgagatggtcgatctggacgatcccgaagcg
ctgaccaagatccgccacgagctgaaagaagctggtgctgagcgtatctggtacatcgcg
gatgctttccgtgccggtctgtctgttgatggtgttttcaacctgacgaacatcgaccgc
tggttcctggttcagattgaagagctggtgaagctggaagccaaggtgaaagaaggtggt
tttgccggtttgacgggtgacttcctgcgtcagctgaagcgtaaaggtttctccgatgcc
cgtctggcaaaactgctgggtgtggcggaactggaaattcgtaaagagcgtgaccgccac
aacatccacccggtttataagcgtgtggatacctgtgcggctgagttctcttctgatact
gcttacatgtactcatcttacgatgaagagtgtgaagcgaacccgactgatcgtgacaag
atcatggtcctgggcggtggtccgaaccgtatcggtcagggaattgaattcgattactgt
tgtgtgcacgcctctctggcactgcgcgaagacggttacgaaaccattatggttaactgt
aacccggagactgtatcaaccgattatgacacgtcagaccgtctgtactttgaaccggtc
accctggaagacgtactgtcgattgttcgtgttgagaaaccaaaaggtgtgattgttcag
tacggtggccagacgccgctgaaactggcccgtgcactggaagcagccggtgtgccgatt
atcggtaccagcccggatgcaattgaccgtgcagaagaccgtgagcgttttcaggctgct
gttgagcgtcttggcctgaaacagcctgaaaatgcgaccgtgacaaccatggagcaggcg
gttgagaaatcaaaagaaattggtttcccgctggtggttcgtccttcgtatgtactgggt
ggtcgtgcgatggaaatcgtctacgacgaagcggacctgcgtcgttacttcaacgaagcc
gtgagcgtatcgaacgaatcaccggtactgctggaccgtttcctggatgacgcaaccgaa
gttgatgtcgatgcgatctgcgacggtgagcgtgttgtcattggcggtatcatggagcat
atcgaacaagcgggtgttcactctggtgactcggcgtgttcgctaccggcttataccctg
agccaggaaattcaggacgaaatgcgccgtcaggtagagaagctggcattcgaactgggt
gtccgcggtctgatgaatacgcagtttgccgtgaaagacaacgaagtttacctgattgag
gtgaacccgcgtgctgcgcgtactgtacctttcgtttctaaagcgaccggtgcaccgctg
gcgaaaattgcggcacgtgtgatggccggacagtcactggaacaacagggctttaccaag
gaaatcattccgccgtattactcagtgaaagaagtggtgctgccattcaacaagttcccg
ggtgttgacccgctgcttggtcctgaaatgcgctctaccggtgaagtcatgggggtaggc
gataccttcgccgaagcctttgcaaaagctgagctgggttgtgggaaggaacacagccgt
gagaatgcgggccgtgcgctgctgtctgtccgtaacaacgacaagcgtcgtgtggttgac
ctggctgccaagctggtgaaactgggttacgagctggatgcgacgcatggtactgcggtg
attctgggcgaagcgggcattaacccgcgtctggtgaacaaggtgcatgaaggccgtcct
cacattcttgaccgaatcaagaacaatgagtacagctacatcatcaacaccgcggaaggc
cgtcaggcgattgaagactcaaaagtcctgcgccgtggtgcgcttgctgagaaggtaaac
tacaccacaacgctgaatgctgcttttgcaacctgtatggcactgactgctgatgaccgt
cacacggtgacttcagttcaggaactgcatgcgcgtttaaatcaagactaa
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