Photobacterium sp. CCB-ST2H9: L4174_013445
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Entry
L4174_013445 CDS
T10200
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
L4174_013445 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_013445 (ung)
Enzymes [BR:
phot01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
L4174_013445 (ung)
DNA repair and recombination proteins [BR:
phot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
L4174_013445 (ung)
Prokaryotic type
L4174_013445 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
TAF1C_C
Motif
Other DBs
NCBI-ProteinID:
UTM56806
LinkDB
All DBs
Position
1:complement(2920276..2920977)
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AA seq
233 aa
AA seq
DB search
MSAPETSFSAPFDWAQFLQQERQQTYLQQAEARVAEERAAGKAIYPPEASVFSAFEATPF
EQVKVVILGQDPYHGPGQAHGLSFSVQPGVKVPPSLANMYKELATDIENFTIPEHGCLQY
WAEQGVLLLNTVLTVEQGKAHSHSKFGWETFTDQVIASLNEHREGLVFLLWGAHAQKKGK
HIDREKHCVLEAAHPSPLSAYRGFFGCRHFSQANQWLRKIHKSEIDWQIPAQI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgtctgccccggaaacatctttttctgccccttttgactgggcacaattcttacaacag
gaacgccagcaaacctatcttcagcaggcagaagcccgggtcgctgaggaaagggcagca
ggaaaagcaatttatccgcccgaagcctctgttttcagtgcttttgaggccacgccattt
gagcaggtgaaggtggtgatcctgggacaggatccataccatggtcccggtcaggcacac
ggcctgagtttttcagtgcagccgggcgtgaaggtaccgccttcgctggccaatatgtac
aaagaactggcgacggatatcgaaaattttaccatcccagagcatggctgtttgcaatac
tgggcggaacagggtgttctgttgctcaatacggtgctgactgttgaacagggaaaagcc
cactctcacagtaaatttggctgggaaacctttaccgatcaggtcatcgccagtctgaat
gagcatcgggaaggtctggtttttctgctttggggcgctcatgctcaaaagaaaggcaaa
catatcgaccgtgaaaaacactgtgtgcttgaagctgcacatccgtcacctttgtctgct
tatcgcggctttttcggctgccgacacttttctcaggcaaatcaatggctgagaaaaatt
cataaaagtgagattgactggcaaatacctgcacaaatttaa
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