Photobacterium sp. CCB-ST2H9: L4174_014235
Help
Entry
L4174_014235 CDS
T10200
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
Transcription machinery [BR:
phot03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
L4174_014235 (rapA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UTM56956
LinkDB
All DBs
Position
1:3110661..3113576
Genome browser
AA seq
971 aa
AA seq
DB search
MPFALGQRWISDTESDLGLGTVVALDARTVTLMFAASEENRVYARHDAPVTRVMFNTGDL
AESQEGWSLKVAQVEEQQGMLTYIGTRTDTGEENVTLREIFLSNQIRFNKPQDKLFAGQI
DRMDRFALRYRALKNQHEQHKSPLRGLCGMRAGLIPHQLFIAHEVGRRFAPRVLLADEVG
LGKTIEAGMIIHQQVLAGRAERILILVPETLQHQWLVEMMRRFNLHFSIFDEERCVESFA
DAHNPFDTAQYVLCSLDFLRKSKRRFEQALEADWDLLVVDEAHHLVWSEDKPSREYQVVE
ALAEKTPGCLLLTATPDQLGHQSHFARLRLLDPDRFYDYDAFLEEERQYAPVADAVSELL
AGKALDDHTRQTLISLLPEQDIAPLLETLTSDSDETAQAAARQELIDSLMDRHGTGRVLF
RNTRAAVQGFPQRHLNLYPLAMPSQYSTAMRVAGMMMGKISEEEKVLKLLYPEDIYQEFE
GDAATWWNFDPRVTWLLDFLKANRNEKVLVICSRAQTALNLEQALREKEGIRATVFHEGM
SILERDKAAAYFAQAEDGAQVLLCSEIGSEGRNFQFANQLVMFDLPNNPDLLEQRIGRLD
RIGQLRDIEIHVPHLQGTSQALLAHWYNEGLNAFEETCPTGRAVYEAVQPQLISLLASDN
HSPEALEALITDSARLHSELKSKMEQGRDRLLEIHSNGGEAARELVSKIAAKDGDTNLVT
FALGLFDTIGLNQDDRGENALVITPSEHMLVSSFPGLPQDGCTITFDRDTALSREDMHFI
SWEHPMIQGGIDLLLSEGVGTTAVSLLKNKALPAGTLLLELVYVVDAQAPKQSGIGRFLP
HTPIRILLDAKGNNLSDKVEFEGFNRQLSPVNRHLGSKLVNSVQKEIHALIAAGDQLVDP
ELDKVRQAARQEMEATLGAELARLQALKAVNPNIRDDELDLLQSQIQDLTAYISKAQIQL
DSLRLIAVSHN
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgccatttgctttgggtcaacgctggatcagtgacacggaaagtgatttagggttagga
actgtggtcgcgctggatgcacgtaccgtcaccctgatgtttgccgccagtgaagagaat
cgcgtttacgcccgtcatgatgcccctgtcacccgtgtgatgtttaacaccggcgatctg
gctgaaagccaggagggctggtcactcaaggtagcgcaggtggaagaacaacagggcatg
ctgacctatatcggcacccgcacggacaccggagaagaaaatgtcacactgcgtgaaatt
ttccttagcaatcagatccgttttaacaagcctcaggacaagctgttcgccggtcagatt
gaccgcatggaccgtttcgccctgcgctaccgtgcgctgaaaaaccagcacgaacaacac
aaaagtccgttgcgtggcctgtgcggcatgcgtgccggattgatcccgcatcagctgttc
attgcccatgaagtcggccgccgttttgcaccgcgcgtcctgctggcggatgaagtcggt
ctgggtaaaaccatcgaggccgggatgatcatccaccagcaggtgctggccggccgtgcc
gaacggattttgatcctggtgccggaaaccctgcagcaccagtggctggtggagatgatg
cgccgcttcaacctgcatttctctatctttgacgaagagcgctgcgtcgaatcctttgca
gatgcacacaacccatttgatactgcccaatatgtgctgtgctcactggatttcctgcgc
aagagcaaacgtcgctttgaacaggctctggaagccgactgggatctgctggtggtcgat
gaagcgcaccatctggtgtggagcgaagacaaaccgagccgtgaatatcaggtcgttgaa
gcgctggctgagaaaacgccgggctgcctgctgctgacggcaaccccggaccagctgggc
catcagagtcactttgcccgcctgcgcctgctcgacccggatcgcttctacgattacgac
gcgtttctggaagaagagcgccagtatgccccggtcgctgatgcagtttccgagctgctg
gccggaaaggcactggatgaccacacccgccagacgctgatcagcctgctgccggagcag
gacatcgctccgctgctggaaacactgacttcagacagcgatgaaaccgctcaggccgcc
gcccgtcaggaactgatcgacagcctgatggaccgccacggcaccggccgtgtgctgttc
cggaatacccgtgccgccgtgcagggcttcccgcagcgtcacctgaatctgtatccgctg
gcaatgccgtctcagtacagcacggcgatgcgcgtcgcgggcatgatgatgggcaagatc
agcgaagaggaaaaagtcctcaagttgctgtatccggaagatatttatcaggaatttgaa
ggcgatgcagccacctggtggaacttcgatccccgcgtgacctggctgctggatttcctc
aaagccaaccgcaacgaaaaagtgctggtgatctgctcccgtgcgcagaccgcgctgaat
ctggaacaggcactgcgggaaaaagaaggcattcgtgccaccgtgttccatgaaggcatg
tcgattctggagcgtgacaaggcagcggcttacttcgctcaggccgaagacggcgctcag
gtgctgctgtgttctgaaatcggctctgaaggccggaacttccagtttgccaaccagttg
gtgatgttcgatctgccgaacaacccggatctgctggagcagcggatcggccgtctggac
cggataggtcagctgcgcgatatcgagattcatgtgccgcatctgcaaggcacttcgcag
gcgctgctggcgcactggtataacgaaggcctgaacgcctttgaggaaacctgtccgacc
ggtcgtgccgtgtacgaagccgtgcagccacaactgatcagcctgctggccagcgataac
cacagtccggaagcactggaagcgctgatcaccgacagtgcccgcctgcacagcgaactg
aagagcaagatggaacagggccgcgaccgcctgctggaaatccattccaacgggggcgaa
gctgcccgtgaactggtcagcaagattgccgccaaagacggcgacaccaatctggtgacg
ttcgcactgggtctgtttgacaccatcggtctgaatcaggatgaccgcggtgaaaatgcc
ctggtgatcacgccgtccgagcacatgctggtctccagcttcccgggactgccgcaggac
ggctgcaccatcacgttcgaccgtgataccgcactgtcgcgcgaagacatgcactttatc
agctgggaacacccgatgattcagggcgggatcgacctgctgctgtcagaaggcgtgggg
accactgcggtttccctgctgaaaaacaaagcgctgccggccgggacattgctgctggaa
ctggtgtatgtggtggatgcgcaggctccgaaacaatccggaatcggccgcttcctgccg
cacacgccaatccgcattcttctggatgccaagggcaacaacctgtccgacaaggtggaa
tttgaaggctttaaccgtcagctgagcccggtcaaccgtcacctcggcagcaagctggtc
aactcggtccagaaggaaatccacgccctgattgcggcgggtgaccaactggtcgaccct
gagctggacaaagtccgccaggcggcccgccaggagatggaagcgacgctcggcgctgag
ctggcccgattgcaggcgctgaaggcggtgaacccgaatatccgtgatgacgaactggac
ctgctgcaaagccagattcaggatctgaccgcttacatcagcaaagcccagattcagctg
gattcgctgcgcctgatcgccgtcagtcataactaa
DBGET
integrated database retrieval system
