Photobacterium sp. CCB-ST2H9: L4174_015320
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Entry
L4174_015320 CDS
T10200
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L4174_015320 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
phot03019
]
L4174_015320 (groL)
03110 Chaperones and folding catalysts [BR:
phot03110
]
L4174_015320 (groL)
03029 Mitochondrial biogenesis [BR:
phot03029
]
L4174_015320 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
phot04147
]
L4174_015320 (groL)
Enzymes [BR:
phot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
L4174_015320 (groL)
Messenger RNA biogenesis [BR:
phot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
L4174_015320 (groL)
Chaperones and folding catalysts [BR:
phot03110
]
Heat shock proteins
HSP60 / Chaperonin
L4174_015320 (groL)
Mitochondrial biogenesis [BR:
phot03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
L4174_015320 (groL)
Exosome [BR:
phot04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
L4174_015320 (groL)
Exosomal proteins of other body fluids (saliva and urine)
L4174_015320 (groL)
Exosomal proteins of breast cancer cells
L4174_015320 (groL)
Exosomal proteins of colorectal cancer cells
L4174_015320 (groL)
Exosomal proteins of bladder cancer cells
L4174_015320 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
REF
Motif
Other DBs
NCBI-ProteinID:
UTM57136
LinkDB
All DBs
Position
1:complement(3327711..3329351)
Genome browser
AA seq
546 aa
AA seq
DB search
MAAKDVKFGNDARVKMLEGVNILADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQSIVNEGLKAVAAGMNPMDLKRGI
DKAVVAAVEELKALSQPCADSKAIAQVGTISANSDATVGNIIAEAMEKVGRDGVITVEEG
QALHDELDVVEGMQFDRGYLSPYFINNQEAGSVDLESPFILLVDKKISNIRELLPTLEAV
AKASRPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTAGTV
ISEEIGMELDKVTLEDLGQAKRVSITKENTTIIDGHGEETAIQGRVVQIRQQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAASKLTELTGDNEEQNVGIRVALRAMEAPIRQITRNAGDEESVVANEVKNGEGNFGYNA
ATGEYGDMLDMGILDPTKVTRSALQFAASVAGLMITTEAMVTELPKGDAPDMSAAMGGMG
GMGGMM
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtaaaatttggtaatgacgctcgtgtaaaaatgctggaaggtgtg
aacattctggctgacgctgtcaaagttaccctgggcccgaaaggccgtaacgtggttctg
gacaagtcgttcggtgctccaaccatcactaaagatggtgtatctgttgcgcgtgaaatt
gagctggaagacaagttccagaacatgggcgcacagatggtgaaagaagttgcttctcag
gcaaacgacgctgccggtgacggtacaacgactgcaacggttctggctcagtcgattgtg
aacgaaggtctgaaagctgtggctgcgggcatgaacccgatggatctgaagcgtggtatc
gacaaagctgtggttgctgcggttgaagaactgaaagcactgtctcagccttgtgcagac
agcaaagcgatcgcacaggtgggtacgatttctgcgaactctgatgcgacggttggtaac
atcattgctgaagccatggaaaaagttggtcgtgatggcgtgatcaccgttgaagaaggt
caggcgctgcacgatgagctggacgttgttgaaggcatgcagttcgaccgcggttacctg
tctccgtacttcatcaacaaccaggaagcaggcagcgtggatctggaaagcccgttcatc
ctgctggttgataagaaaatctcgaacatccgtgaactgctgccaacgctggaagcggtt
gcaaaagcttctcgtccgctgctgatcattgcagaagatgttgaaggtgaagcgctggcg
acactggttgtgaacaacatgcgtggtatcgtgaaagtggctgctgtgaaggcaccaggt
ttcggtgaccgtcgtaaagcgatgctgcaagacatcgctgtgctgactgcaggtactgtg
atttctgaagaaatcggcatggagctggacaaagtgactctggaagatctgggtcaggcc
aagcgtgtcagcatcaccaaagaaaacaccactatcatcgatggccatggtgaagaaact
gcgattcagggccgtgtggttcaaattcgtcagcaaatcgaagaagcgacttcagactac
gacaaagagaaactgcaagagcgtgttgctaaactggcaggcggtgttgctgtgatcaaa
gttggcgctgccactgaagttgaaatgaaagagaagaaagaccgcgttgaagatgccctg
cacgcaacccgtgctgcggttgaagaaggcgtggttgccggtggtggtgttgccctgatc
cgtgcggcttctaaactgactgagctgactggcgacaacgaagagcaaaacgtaggtatc
cgtgttgcgctgcgtgccatggaagcgccaatccgtcaaatcacccgtaacgctggtgac
gaagagtctgtcgttgcgaacgaagtgaagaatggcgaaggtaacttcggttataacgct
gcaaccggcgaatacggcgacatgctggacatgggtatcctggatccaaccaaagtaacc
cgttctgcactgcaatttgcagcgtctgttgctggcctgatgatcaccaccgaagcgatg
gtgactgaactgccaaaaggcgacgcgccagatatgagcgccgcgatgggcggtatgggt
ggcatgggcggcatgatgtaa
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