Photobacterium sp. CCB-ST2H9: L4174_015385
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Entry
L4174_015385 CDS
T10200
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
phot Photobacterium sp. CCB-ST2H9
Pathway
phot03030
DNA replication
phot03430
Mismatch repair
phot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L4174_015385
03430 Mismatch repair
L4174_015385
03440 Homologous recombination
L4174_015385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
phot03032
]
L4174_015385
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_015385
Enzymes [BR:
phot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L4174_015385
DNA replication proteins [BR:
phot03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L4174_015385
DNA repair and recombination proteins [BR:
phot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L4174_015385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UTM57148
LinkDB
All DBs
Position
1:3347453..3348166
Genome browser
AA seq
237 aa
AA seq
DB search
MNILRRWWYQYKFRQHPIKALFERYRGEELVSLDCETTSLDPASAELVSIAATRIRANRI
LTSESLHLTLSPPDSLNADSVTIHRLRHQDLKHGLDAQEALTQLLEFIGNRPLVGYHIRY
DKTILDRYFRRLFGFTLPNRLVEVSHLYHEQLERQLPNTSYDLSLEAISRHLDLPQSERH
DALQDSITAALIYVRLKHGDLPSLTSPPFFSNPSARHDATQCKTGEKVMTAHTHPKV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgaatatactgcgtcgttggtggtatcagtacaaattccgccaacatccaatcaaagcc
ctgtttgaacgttaccgcggtgaagagctggtgtcgctcgactgtgaaaccaccagcctg
gacccggccagcgctgaactggtctcaattgcggccacccgcatccgtgcgaaccggatc
ctgaccagcgagtcgctgcacctgacgctcagcccgcccgacagtctgaatgccgactcc
gtcacgatccaccgattgcgtcatcaggatctgaaacacgggctggacgctcaggaagcg
ctgacccagcttctggaatttatcggaaaccgtcccctggttggctaccatatccggtat
gacaagacgatccttgaccgctatttccgacggctgtttggttttaccctgcccaaccgg
ctggtagaggtcagtcacctgtaccatgaacagctggagcgccagttacccaataccagc
tatgatttaagtctggaagccatcagccgtcatttggatctgcctcagagtgagcggcat
gatgcccttcaggacagtatcactgccgcactgatttatgtccggctgaaacacggggat
ctgccgagcctgacatcgccgccgtttttttcgaacccgtccgcccggcacgatgcaacc
cagtgtaaaaccggagaaaaagtcatgacagcgcacactcatcctaaagtctaa
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