Photobacterium sp. CCB-ST2H9: L4174_016300
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Entry
L4174_016300 CDS
T10200
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
phot03009
]
L4174_016300 (rsmB)
Enzymes [BR:
phot01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
L4174_016300 (rsmB)
Ribosome biogenesis [BR:
phot03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
L4174_016300 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_37
Methyltransf_31
FtsJ
Methyltransf_25
Methyltransf_5
MTS
Cons_hypoth95
Methyltransf_11
Motif
Other DBs
NCBI-ProteinID:
UTM57290
LinkDB
All DBs
Position
1:3535213..3536511
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AA seq
432 aa
AA seq
DB search
MNVRAAAAQVIYQVVDQGQSLSTALPAAQQEIKPRDHALLQEICYGVLRWLPRLESVTQA
LMDKPLKGKQRVFHHLILVGLYQLSFMRIPAHAAVAETVDATKPLKKPQLRGLINAVLRN
YQRQQETLDQQAMSHDAGKYGHPGWLLNMLRAHYPEQLEAVTSANNTKAPMWLRVNRRHH
TRDQYQSLLDAAEISAAVHPQAGDALKLASACDVQQLPGFAEGWVSVQDAAAQLAVDYLQ
PKAGELILDCCAAPGGKTAHILEREPGARVVAIDSDDHRLLRVKDNLQRLKLDAEVLCAD
ARFPQQWWQGEAFDRILLDAPCSATGVIRRHPDIKWLRRADDIAALATLQAEILDAMWQQ
LKPGGTLVYATCSIMPQENREQVLAFLARTPDASLAAREDNGSDTAPGRQILPGESDMDG
FYYAVLEKRPSV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaagagctgctgcggcccaggtgatttatcaggttgtagatcaaggccaatcg
ctttcgacggccctgcctgcggcccaacaagagatcaaaccccgcgaccatgccctgctg
caggaaatctgctatggcgtgctgcgctggctgccgcgtctggaatcggtgactcaggca
ctgatggataaaccgctcaaaggcaagcagcgggtcttccaccacctgatcctggtcggt
ctctatcaactgagttttatgcggattccggcccatgctgcggtggcagaaaccgtggat
gcgaccaaacccctgaaaaagccccagctgcgcggcctgatcaacgctgtactgcgtaat
taccagcgccagcaggagacactggatcagcaagccatgagccacgatgccggcaaatac
ggtcatccgggctggctgctgaatatgttgcgggctcattacccggagcagttggaagcc
gtcacgtccgccaataataccaaggcgccaatgtggctgcgggtcaatcgccgtcaccat
acccgtgaccagtaccaaagcttgcttgatgctgcagagatcagtgccgctgttcatccg
caggcaggtgacgccctgaaactggccagtgcctgcgatgtccagcaactgccgggcttt
gccgaaggctgggtgtccgtgcaggatgctgcagcccagttagcggtcgattacttgcag
ccgaaggccggcgagctgatccttgactgctgtgccgcaccgggtggtaaaaccgcgcat
attctggaacgcgaaccgggagcccgtgtagttgcgatcgacagtgacgaccaccgcctg
ctgcgagtcaaagacaacctgcaacgcctgaagctggacgctgaagtactgtgtgccgat
gcacgttttccgcaacaatggtggcagggggaagcgttcgatcggatcctgctcgacgct
ccttgctcagccacaggtgttatccgtcgtcacccggatatcaaatggctgcggcgggcc
gatgacattgccgcactggcaacgctgcaggccgaaattctggatgcgatgtggcagcaa
ctgaagccgggcggcacactggtttacgcaacctgctccatcatgccgcaggaaaaccgt
gaacaggtactcgccttcctggcccgcaccccggatgcaagtctggcggctcgcgaagac
aatggaagcgacacagcgccgggacgccagatcctgcccggtgaatcggatatggacggc
ttttattacgccgtactggaaaaacgtccgtcagtgtga
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