KEGG   Photobacterium sp. CCB-ST2H9: L4174_017060
Entry
L4174_017060      CDS       T10200                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
phot  Photobacterium sp. CCB-ST2H9
Pathway
phot03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:phot00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    L4174_017060 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:phot02044]
    L4174_017060 (tssH)
Secretion system [BR:phot02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   L4174_017060 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA ClpB_D2-small AAA_16 AAA_5 AAA_22 Clp_N nSTAND3 Sigma54_activat Ran-binding AAA_7 AAA_25 TniB bpMoxR FlxA RuvB_N Zeta_toxin AAA_33 DUF5129 DUF4715 Bap31_Bap29_C MTR4-like_stalk
Other DBs
NCBI-ProteinID: UTM59781
LinkDB
Position
2:complement(116960..119623)
AA seq 887 aa
MINVNLASLIQRLHPIAKVALEDAAALAVSERSTEVSIEHYLLSLLERPNSDFDCILASF
DCSENLIRQSLNASLQRSAKAAGGKPVFSALLIEWLQETWLMSSIDLGHQQIRTGALLLT
LVKNPVRYGQHDIQELFEPINSETLKRNFNQFTAESIEAQVASTESSEPRQEGSALSKFT
IDFTGKAREGKIDPVFCRDREIRQIIDILARRRKNNPIAVGEPGVGKTAVVEGLALKIVE
GDVPDILKGVELFGLDMGLLQAGASVKGEFEKRLNGVLEEVKNSPTPIILFIDEAHTLVG
GGNQAGGSDAANLLKPALARGEVKTIAATTWSEYKKYFEKDPALARRFQLVKLDEPSPKE
AALIIRGLRPAYEKAHNIYVRDDAIACAAEMSSRYISGRQLPDKAIDVLDTACARVNISL
RSTPAPVESLQQQIASLQRELDGLKRDEIQQTGDKKNATLIPHIESQIVELTEELAELTA
QWAEEKALIDEMISLREKLHIATGEAEADADSEATEAAEETVDMDEASIREAILRCQRAL
DECRGDEALVHFEVGPAEISQVIADWTGVPVGKVLKDESASVLNLSDSLSGAIKGQPFAI
DSLSEGIRAAKASLMNPDAPMGVFLLVGPSGVGKTETARVVADQLFGGERFMTTINMSEF
QEKHTVSRLIGSPPGYVGYGEGGMLTEAVRQRPYSVVLLDEVEKADPEVMNLFYQVFDKG
VLNDGEGRAIDFKNTLILMTSNLATQEIEALSQQSDDITASQIGEAIRPTLNRYFKPALL
ARMNVIPYLPLADDAMTDIIKHKLGKLGERLKTHHDLTLAFEQDLVDFVLGHCRLSETGA
RNIDAVINRQLLPQLSTELLSHQGEESTHTTLTISVDEQGMIEYAFS
NT seq 2664 nt   +upstreamnt  +downstreamnt
atgattaacgtaaatttagcttctctgattcagcgtctgcatcccattgcaaaagttgct
ctggaagatgcagccgcacttgctgtgtctgaacgttcaacagaagtatcgattgaacat
tatttattgagcctgcttgaacgcccgaacagtgactttgattgtattctggcgagtttt
gactgctctgaaaatttaattcgccagtcactgaatgcttctttacagcgcagtgcaaaa
gccgcaggcggcaaaccggtgttttctgccctgctgattgaatggctgcaggaaacctgg
ctgatgtcttccattgatctgggccatcagcaaatccgtaccggcgctctgctgctgaca
ctggtgaaaaacccggtccgctacggccaacatgacattcaggaactgttcgaaccgatt
aacagtgaaaccctgaaacgcaacttcaaccagtttaccgcggagtcgattgaggctcag
gttgccagcacagaaagcagtgagccgcgtcaggaaggttcggcactgagcaagttcacc
attgatttcacaggtaaagcacgcgaaggcaaaattgaccctgtgttctgccgtgaccgc
gagatccgccagatcattgatattctggcccgtcgccgtaaaaacaatccgattgccgtt
ggtgagcccggcgttggtaaaactgccgtggttgaaggcctggccctgaagattgttgaa
ggcgatgtgccggatattctgaaaggcgtagagctgtttggcctggatatgggcttactg
caggctggcgccagcgtgaaaggtgaatttgaaaaacgcctgaacggtgtgctggaagaa
gtgaagaactcacccacgccaatcattctgtttattgatgaagcacacacactggttggc
ggcggaaaccaggctggcggcagtgacgcagccaacctgctcaaaccagcactagcccgc
ggcgaagtgaaaactattgctgccacgacctggtcggaatacaagaagtatttcgagaaa
gacccggctctggcccgccgtttccagctggtcaaactggatgagccctctccgaaagaa
gccgcactgatcatccgtggtctgcgtccggcttacgaaaaagcgcacaatatttatgtc
cgtgatgatgcaattgcctgtgcggcagaaatgtcttcccgatatatttcaggtcgtcag
ctcccggataaagcaattgatgttctggatacggcctgtgcccgtgtaaacatcagcctg
cgctcaacgccggccccggttgaaagtctgcaacaacagattgcctcactgcaacgtgag
ctggacggtctgaaacgtgacgaaattcagcaaaccggtgataagaaaaatgccacgctg
atcccgcacatcgaaagccagattgtcgaactgacagaagaactggccgaactgaccgca
caatgggcagaagaaaaagcgctgattgatgaaatgatcagtctgcgcgaaaagctacat
atcgcgaccggtgaagcagaggctgacgctgattctgaagcaaccgaagccgcagaggaa
accgtggacatggacgaagcgtcgatccgcgaagccattctacgctgtcagcgggcactc
gacgaatgccgcggtgatgaagcactggttcactttgaagttggtccggctgaaatcagt
caggtcatcgcagactggacaggcgtcccggtcgggaaagtgctgaaagatgaatccgct
tctgtgctgaatctgagcgattctctgtctggcgccatcaaagggcagcctttcgccatt
gattccctgagtgaagggattcgtgcagcgaaagccagcttgatgaacccggatgcaccg
atgggtgtattcctgctggtcggcccgagtggtgtgggtaaaaccgaaaccgcacgcgtg
gttgccgatcagttattcggtggtgagcgctttatgaccaccatcaatatgtcggaattc
caggagaaacataccgtttcccggctgatcggctcacctccgggctatgtcggttatggt
gaaggtggcatgctgacggaagccgttcgccagcgaccttactccgttgtcctgctcgac
gaagtcgaaaaagccgatcctgaagtcatgaacctgttctatcaggtctttgacaaaggg
gtgctgaacgacggtgaaggccgtgcgattgacttcaagaacaccctgatcctgatgacc
agtaacctggcaacacaggagattgaagcgctgtctcagcagagtgacgacatcacggcg
tcgcaaattggtgaagcgattcgtccgacactgaaccgctacttcaaaccagctctgctg
gcccgaatgaatgtgatcccttatctgccactggctgatgacgcgatgaccgacatcatc
aagcataaactgggcaaactgggcgagcgcctgaaaacacaccatgatctcacactggcc
tttgaacaggatctggtcgatttcgtactgggccactgccgcctgagcgaaacgggtgcc
cgtaacattgatgcggtcattaaccgccagttactgcctcagctgtcgaccgagctgctg
tcgcatcagggtgaggaaagcacccataccacactgacgatttccgtcgatgaacaagga
atgatcgagtatgccttcagttaa

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