Photobacterium sp. CCB-ST2H9: L4174_019125
Help
Entry
L4174_019125 CDS
T10200
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
phot Photobacterium sp. CCB-ST2H9
Brite
KEGG Orthology (KO) [BR:
phot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
phot03400
]
L4174_019125 (phrB)
Enzymes [BR:
phot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
L4174_019125 (phrB)
DNA repair and recombination proteins [BR:
phot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
L4174_019125 (phrB)
Prokaryotic type
L4174_019125 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DUF7939
Motif
Other DBs
NCBI-ProteinID:
UTM60171
LinkDB
All DBs
Position
2:complement(561831..563297)
Genome browser
AA seq
488 aa
AA seq
DB search
MASSKTQTSLMWFRADLRTVDNTALIQACRQNKPVLAVFYATPEQWARHDTAPIQIDFIR
RRLTELQSQLADCNIPLRVETVADFAAIPESITALANAWQVTHVFCNKQYEWNEKQRDLA
VGRALKSAGIKFSVFEDTCVIPAGQVLNRQGDPFKVYTPFRRTWIEQFLLSPAWAQPVPE
AVAHPDNMSAFGTDLDESLSRDCLAYPEADSSQWPVDESSVRQRLMRFCIEKIQDYGEQR
DIPAVDGTSGLSPYLAVGAISARQCVTAVLHEYPNTLEKQEEGPFIWLNEIIWREFYRHL
IEAYPQVSREQPFVNWTRKVRWHANQTALEQWQHGQTGFPIVDAAMRQLKATGWMHNRLR
MITASFLTKDLLIHWREGEKWFMSHLIDGDLASNNGGWQWAASTGTDAQPYFRVFNPTAQ
GKKFDPGGAFIRTWVKELAHVPDKYIHNPYDWPDVKNLDYPPPMVDHKSARLHAIEVFKQ
AKAAAEAN
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagtaagacacagaccagtctgatgtggttccgggccgatttgagaaccgtg
gataacaccgcattgattcaggcctgtcggcagaacaaaccggtgcttgcggtgttttat
gcaacgcctgaacaatgggcaaggcatgataccgcgccgattcagatcgatttcattcgt
cgtcgtttaaccgaactgcaatcccagctggccgattgcaatatccctctgcgggtcgaa
accgttgctgattttgcagcgatcccggaatccattaccgctctggcgaatgcatggcag
gtaacccatgtgttctgtaataaacagtacgagtggaatgaaaaacagcgcgatctggct
gtggggcgggctttaaaaagcgccgggatcaaattcagtgtgtttgaagatacctgtgtc
attccggccgggcaggtgctcaaccggcagggcgacccttttaaagtttatacccctttt
cggaggacctggattgaacagtttctcctcagcccggcatgggcccagcctgttccagag
gctgttgcgcatccagacaatatgagtgcgttcggcactgatctggatgaaagtctcagc
cgtgattgtctggcttacccggaagcagacagcagccagtggccggttgatgaatcctca
gtccggcagcgtctgatgcgcttttgcattgaaaaaattcaggattacggcgagcagcgg
gatattccggctgtcgatggtaccagcggtttgtcgccgtatctggctgttggcgccatt
tcagcgcgtcagtgtgtcactgctgtattgcatgagtatccgaatacgctggagaaacag
gaagaagggccctttatctggctcaatgaaattatctggcgggagttttaccggcatctg
attgaggcttatccgcaagtcagccgggagcagccatttgttaactggacaagaaaagtc
cggtggcatgcgaatcaaactgctctggaacaatggcagcacgggcagaccggatttccg
atagtggatgccgcgatgcgacagctgaaagcaaccgggtggatgcataaccggctgcgg
atgattacggccagctttctgaccaaggatttgctgattcactggcgggaaggcgagaaa
tggttcatgtcgcatctgatcgatggcgatctggcatccaacaatggcggctggcaatgg
gcggcctcgaccgggactgatgctcagccttacttccgggtctttaatccgaccgcacag
ggcaaaaagtttgacccgggcggtgcgtttatccggacctgggtgaaagagctggcccat
gtcccggataaatatattcataacccttatgactggcctgatgtgaaaaaccttgattat
ccgccaccgatggtggatcacaaatcggcaagactgcatgcgattgaagtatttaaacag
gcaaaagctgcagcagaagcgaactga
DBGET
integrated database retrieval system
