Phaeobacter porticola: PhaeoP97_00056
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Entry
PhaeoP97_00056 CDS
T04595
Name
(GenBank) putative HTH-type transcriptional regulator GntR
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
php
Phaeobacter porticola
Brite
KEGG Orthology (KO) [BR:
php00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
php03000
]
PhaeoP97_00056
Transcription factors [BR:
php03000
]
Prokaryotic type
Helix-turn-helix
LacI family
PhaeoP97_00056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
LacI
Peripla_BP_3
Peripla_BP_4
Sigma54_DBD
HTH_10
HTH_23
Sigma70_r4
HTH_3
HTH_Tnp_Tc3_2
HTH_IclR
HTH_31
HTH_Tnp_ISL3
TrmB
HTH_24
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
APG45511
UniProt:
A0A1L3I056
LinkDB
All DBs
Position
53261..54286
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AA seq
341 aa
AA seq
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MTTDNKRPLTLRDVSEATGVSEMTVSRVLRNRGDVSEKTRKKVLTAAKELGYVPNKIAGA
LASNRVNLVAVIIPSLSNMVFPEVLTGINSILENTDLQPVVGVTDYQPEKEEKVLYEMLS
WRPSGVIIAGLEHTEAARAMLNASGIPVVEVMDTDGKPVDAMVGISHRRAGREMAKAILK
AGYRHIGFMGTKMPLDHRARKRFEGFTEALAKEGVEIEDRAFYSGGSALAKGREMTQEML
ERSPELDFLYYSNDMIGAGGMLYLMDQKIDIPGQIGLAGFNGVELLQGLPRQLATMDACR
LEIGRKAAEIIAAQLDNPDQEIEKHVTLTPTITYGDTLKRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacggacaacaagcgcccgcttacccttcgtgatgtatccgaagcaaccggcgtt
tcagagatgactgtcagccgtgttctgcgcaatcggggggatgtttcagagaagacccgg
aaaaaggttctgacggccgccaaggaactgggctatgtgcccaacaagatcgctggcgcg
ctggcgtcgaaccgggtcaatctcgtggcggtgatcatcccgtcgctgtccaatatggtg
tttcctgaggtgctgacgggcatcaattcgatactggaaaataccgatctgcagcccgtg
gtcggggtgacggattaccagcccgagaaagaagaaaaagtcctttacgagatgttgtcc
tggcggccgtctggcgtgatcattgccggattggaacacacagaggcggcgcgcgcgatg
ttgaatgcgtcgggcattccggtggtcgaggtcatggacactgacggcaaaccggtggac
gcgatggtggggatttcgcatcgccgcgcgggccgtgaaatggccaaggccatcctcaag
gcgggctatcgtcacattggcttcatgggcaccaagatgccgctggaccaccgcgccaga
aagcggtttgagggctttaccgaggcgctggccaaggaaggcgttgagatcgaagatcgc
gcgttttattctggtggttcggcgctcgccaaggggcgggaaatgacacaagagatgctg
gaacgctctcctgagcttgattttctctattactccaacgacatgatcggcgcaggcggg
atgctctatctgatggatcagaagatcgatatccctggtcagatcggtcttgccgggttc
aacggggttgagctgttgcaaggtttgccgcgccagctagccacgatggacgcctgtcgt
ctggaaatcgggcgcaaagctgccgagatcatcgcggcgcagctcgacaacccggatcag
gagatcgagaaacacgtgaccctgaccccgaccatcacctacggcgacacgcttaagcgg
cgctga
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