Phaeobacter porticola: PhaeoP97_00104
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Entry
PhaeoP97_00104 CDS
T04595
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
php
Phaeobacter porticola
Pathway
php03030
DNA replication
php03410
Base excision repair
php03420
Nucleotide excision repair
php03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
php00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PhaeoP97_00104 (polA)
03410 Base excision repair
PhaeoP97_00104 (polA)
03420 Nucleotide excision repair
PhaeoP97_00104 (polA)
03440 Homologous recombination
PhaeoP97_00104 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
php03032
]
PhaeoP97_00104 (polA)
03400 DNA repair and recombination proteins [BR:
php03400
]
PhaeoP97_00104 (polA)
Enzymes [BR:
php01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PhaeoP97_00104 (polA)
DNA replication proteins [BR:
php03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PhaeoP97_00104 (polA)
DNA repair and recombination proteins [BR:
php03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PhaeoP97_00104 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PhaeoP97_00104 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
APG45559
UniProt:
A0A1L3I096
LinkDB
All DBs
Position
complement(113681..116494)
Genome browser
AA seq
937 aa
AA seq
DB search
MTTTPFGTGCHLHLIDGSAFIFRAYHALPPLTRKSDGLPIGAVAGFCNMLHRYVEGNTGP
DAPTHVAVIFDKGSHTFRNDLYDQYKANREAMPEDLRPQIPLTRTATEAFNIACKEQEGF
EADDIIATLSCRAREAGGRVTIISSDKDLMQLVGGGVEMLDAMKNKRIDSDGVHEKFGVG
PDRVVDVQALAGDSVDNVPGAPGIGIKTAALLINEYGSLDELLDRAEEIKQPKRRQTLIE
KRDQIELSRQLVQLDCNMDLNFTLDDLGVREPQADQLLGFLAEMEFRTLSKRVADQFGKE
APAIAEASVGTAATTNAPAVVDLPFDSTAYECVRDAAALNKWIAQIRDRGWVAVDTETTG
FDEMVVELVGISLCVEPGTACYIPLTHKSGSSNDLFGSDELAEGQMPLDDALSLLKPVLE
DDSILKIGQNMKYDAKIFARRGIDVAPIDDTMLMSYAMHAGQHGHGMDTLSERYLNHTPI
PIKPLLGTGKSAITFDRVPIDDAVAYAAEDADVTLRLWQFFKPQLHQAGVTTVYETLERP
LVPVLARMEREGIKVDRDTLSRMSNAFSQKMAGLEAEIHEQAGQTFNVGSPKQLGEILFD
KLGLEGGKKGKTGAYATGADILEDLATEHSLPGLVLDWRQLSKLKSTYTDALQDHINAET
GRVHTSYVQTGANTGRLASTDPNLQNIPVRSEEGRRIREAFVPEDGNVLLSLDYSQIELR
ILAHVAGIDTLKQAFAEGQDIHALTASEMFNVPLDEMTPDIRRQAKAINFGVIYGISGFG
LARNLRIPRAEAQGFIDRYFERFPGIRRYMDDTVAFAKEHGHVQTLFGRKIHTPEIAAKG
PRAGFAKRAAINAPIQGTAADVIRRAMIRMPDAIAHLPARMLLQVHDELLFEVPEGSVDD
TIETARRVMETAADPAVHLDVKLVVDAGQGRNWAEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccccatttggcaccggctgccacctgcatctgatcgacggatcggccttt
atctttcgcgcctatcatgcgctaccgccgctgacgcgaaaatccgacggattgccgatt
ggggccgtagccgggttctgcaacatgctgcaccgctatgtcgagggcaataccggcccg
gacgcgccgacccatgtcgcagtcattttcgacaaagggtcgcacaccttccgcaacgat
ctctatgatcagtacaaggccaatcgcgaagccatgcccgaggatctgcgcccgcagata
ccactgacccgcaccgcgaccgaagcgttcaatatcgcctgtaaagagcaagaagggttt
gaggcagatgacatcatcgccacactttcctgccgcgcccgcgaggcagggggccgcgtc
accatcatctcgtctgacaaggatctgatgcagctggtcggtggcggcgtagaaatgctg
gacgccatgaagaacaagcgtattgatagcgatggcgtgcatgagaaattcggtgtcggt
cccgaccgcgttgttgatgtgcaggcgctggccggcgacagcgtcgacaacgttccgggc
gcgcccggcatcgggatcaaaaccgctgccctgttgatcaacgagtacggcagcctagat
gagctgctggaccgggccgaggaaatcaaacagccgaaacgacgccagaccctgattgaa
aaacgagaccagattgagctgtcacgccagcttgttcagcttgattgcaatatggatctg
aactttaccctcgatgatctcggcgtgcgcgaaccccaggctgatcagttgcttggcttt
ttggccgagatggaattccgcactctgtcaaagagggttgcagatcagtttggcaaagaa
gccccagcaatcgcagaggcatccgtcggcaccgctgccactacaaacgcacctgccgtg
gtcgatttgccatttgacagcaccgcttacgaatgcgtccgcgatgctgccgcgctaaac
aaatggatcgcccaaatccgcgaccgcggttgggtggccgtggataccgaaaccacgggc
tttgatgagatggtcgtcgagcttgtcggtatctcgctttgcgtcgaacccggcaccgca
tgctatattccgctgacccacaaatctggcagcagcaatgacctgtttggttcagacgag
ctggcggaggggcagatgccgcttgatgacgcgctgtctttgttgaaaccagtgctcgaa
gacgacagcattctcaaaatcgggcagaacatgaaatacgatgccaagatctttgcccgt
cggggcatcgacgtggcaccgatcgacgacaccatgttgatgtcctacgccatgcacgca
ggccaacacgggcatggcatggacacgttgtcagagcgctatctgaaccacacaccgatt
cccatcaaaccgctcctcggcaccggtaaatctgcgatcacctttgaccgtgttccgatt
gacgacgccgtcgcctacgcggcagaagatgccgatgtcacgctgcgtctctggcagttc
ttcaaaccgcagctgcaccaggccggtgtcaccacggtatatgagacgttggaacgcccc
cttgtaccagtgctcgcccggatggaacgcgaaggcatcaaggtcgaccgcgatacactc
tcacgcatgtctaacgccttttcccaaaagatggcggggcttgaggccgagattcatgaa
caagcaggccagaccttcaatgttggctcgccaaagcaacttggcgagatcctcttcgac
aaactaggtcttgaaggtggcaaaaaaggcaagacgggggcctatgccaccggcgccgac
attctggaagatcttgcgaccgaacacagcttgccggggctggtgttggattggcgccag
ctgagcaagctgaaatcgacttatacagatgccttgcaggaccatatcaatgcggaaacc
gggcgtgttcatacctcttatgtacagaccggcgcgaacaccgggcggctcgcctcgacc
gatccgaacctgcaaaacatccctgtccgctcagaagaagggcgccgcatccgcgaggct
tttgtgcccgaggatggcaacgtgctgctgtcgctggactacagccagatcgaattgcgc
atcctcgcccatgtcgccggaatagatacgctgaaacaggcctttgccgaaggtcaggac
atccacgcattgaccgcctctgagatgttcaacgtaccgctggatgaaatgacaccagac
atccgccgtcaggccaaagctatcaactttggggtgatctatggaatctccggttttggt
ctagcccgcaatctccgcatccctcgtgccgaggcacagggatttattgaccgctatttt
gagcgtttccccggcatccgccgctacatggacgacactgtcgcatttgcaaaagaacac
ggtcatgtccagacgctcttcgggcgcaagatccacacaccggaaatcgccgccaagggg
ccgcgcgcaggctttgccaaacgcgcagccataaacgccccgattcaaggcaccgctgcc
gacgtgatccgccgcgcgatgatccgcatgcctgacgccatcgcgcatctacctgcccgg
atgctgttacaagtccacgatgaattgctgttcgaagtgccggagggttcagtcgacgac
accatcgaaacggcgcgccgcgtgatggaaaccgcagcagatccggctgtccatctggac
gtcaaacttgtcgttgatgcaggccaaggtcgcaactgggcggaagcacactga
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