Phaeobacter porticola: PhaeoP97_00912
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Entry
PhaeoP97_00912 CDS
T04595
Name
(GenBank) Superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
php
Phaeobacter porticola
Pathway
php03420
Nucleotide excision repair
php03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
php00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PhaeoP97_00912
03430 Mismatch repair
PhaeoP97_00912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
php03400
]
PhaeoP97_00912
Enzymes [BR:
php01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PhaeoP97_00912
DNA repair and recombination proteins [BR:
php03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PhaeoP97_00912
MMR (mismatch excision repair)
Other MMR factors
PhaeoP97_00912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APG46339
UniProt:
A0A1L3I2K4
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All DBs
Position
910633..913071
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AA seq
812 aa
AA seq
DB search
MSCHDIRAEQTVNALFPPGLKRANVPLMSSFDDIDPYEGISLSARAMAARPMPYLDGLNP
AQRAAVECLEGPVLMLAGAGTGKTKALTARIVHLLTTGTAKPNEILAVTFTNKAAREMKE
RVAGMLGQAVEGMPWLGTFHSICVKLLRRHAELVGLKSNFTILDTDDQIRLLKQLIKAEG
IDDKRWPARMLAGVIDDWKNRALTPSKVPVSDASAYNHRGVDFYAQYQARLKDLNAVDFG
DLLLHMVTIFQDNPDVLEQYQRWFRFIMVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDD
QSIYGWRGAEVGNILRFEKDFPGANVVRLEQNYRSTEHILSAASGVIRGNSGRLGKELWT
EARGGEKVRLIGHWDGEEEARWIGEEIEAMQRGTRGLAPVDLNNMAILVRASHQMRAFED
RFLTIGLPYRVIGGPRFYERLEIRDAMAYFRQVISPDDDLAFERIVNTPKRGLGDKAQQT
IQTMARSNGVSLVEGARLAVESGQIKGKGGKALHQLVTDLARWGRLAGDADTTHMELAEI
ILDESGYTTMWQTDKNPDSPGRLENLKELVKALEAFENLQGFLEHVSLIMDNDKQDAAQK
VSIMTLHAAKGLEFPAVFLPGWEDGLFPSQRSMDESGLKGLEEERRLAYVGITRAEEICT
ISFAGNRRVFGQWQSQLPSRFIDELPEQHVEVLTPPGLYGGGYGAAASSAGPVRSTIEER
MASADGYNSPGWKRMQARAGERGLSQPRESKSSVIDLTATSAFTVGERVFHQKFGYGAII
GIEGDKLEVDFEKAGAKKVVARFVTAEDGVPF
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgagctgccatgatattagggcggaacagactgtgaacgccctctttccgccgggattg
aaacgcgctaatgtcccgctcatgagcagttttgacgatatcgacccctacgaggggatt
tcgctgtccgcgcgcgccatggcagcgcggccgatgccgtatctcgacgggttgaacccg
gcgcagcgtgccgccgttgaatgtctggaggggcccgtcttgatgctggccggggccggc
accggcaagaccaaggcgctgactgcgcggatcgtccatctgctgaccaccgggactgcc
aaaccaaacgagatcctcgccgtgacctttaccaacaaggctgcgcgcgagatgaaagag
cgggttgcaggcatgttggggcaggcggttgaggggatgccctggcttggcaccttccac
tcgatctgcgtgaaactgctgcgccgccatgccgaactggtcgggctgaaatcaaacttc
accattctggataccgatgatcagatccgcctgctgaaacagctgatcaaggcggaaggc
atagatgacaaacgctggcccgcgcgcatgctggcgggcgtcattgacgattggaaaaac
cgcgcgctgacgccctccaaggtgccggtctcagacgccagcgcctacaatcaccgcggc
gtggatttctatgcccagtatcaggcgcggctgaaggatctgaacgctgtcgattttggc
gatctcctgctgcatatggtcactattttccaggacaacccggatgtgctggagcaatac
caacgctggttccggttcatcatggtggacgaataccaggataccaatgtggcgcagtat
ctctggctgcggttgctggcgggcgcgcataaaaacatctgctgcgtcggtgatgatgac
cagtcgatctatggctggcgcggtgcagaggtgggcaatatcctgcgctttgaaaaggat
tttcccggcgccaatgtggtgcggctggaacaaaactaccgctcgaccgaacatattctc
agcgccgcctctggcgtgatccgtggcaattccggccgtctgggcaaagagctctggacc
gaggcgcgcggtggcgagaaggtccgcctgatcggtcattgggacggcgaggaggaggct
cgctggatcggcgaagagattgaggcgatgcagcgcggcacccgtggtctggcaccggtg
gatctcaacaatatggcgatccttgtgcgcgcctcgcaccagatgcgcgcctttgaggac
cggttcctgaccattggtttgccatacagggtgatcggcggcccgcgcttttatgaacgg
ctcgaaattcgcgacgcgatggcctatttccgccaggtgatcagccctgatgatgatctc
gcgtttgagcggatcgtgaacacccccaaacgtggtcttggcgataaggcgcagcagacc
atccagaccatggcgcgcagcaatggcgtctcattggttgaaggcgcgcggcttgcggtg
gagagtggccagatcaaggggaagggtggcaaagccctgcaccagctggttaccgatttg
gcacggtggggacggctcgccggagatgcagacaccacccatatggagctggctgagatc
attctggatgaaagcggctataccaccatgtggcagaccgacaaaaatccggattcgccg
ggccgtctggaaaacctcaaggaattggtcaaggcactggaggcgtttgaaaacctgcaa
ggcttcctcgaacatgtcagcctgatcatggacaatgacaaacaggacgccgcccaaaag
gtgtcgatcatgacgctgcatgccgccaaggggctggaatttcctgccgtcttcctgccg
gggtgggaggatggcctgttcccctcgcagcgctccatggacgaaagcggcctgaagggc
ctcgaagaggaacgccgtctggcctatgtcggcatcaccagggcggaggaaatctgcacc
atttcctttgccggtaaccgccgggtctttgggcagtggcaatcacagctgccgtcacgg
ttcattgatgaactaccagagcaacatgtggaggtgctgacgccaccgggtctttatggt
ggcggctatggcgctgcggccagcagtgcagggccagtgcggtccacaatcgaagagcgg
atggcctctgcggatggatataactcccccggttggaagcggatgcaggcgcgcgctggc
gagcgcgggctgtcacagcccagggaaagcaagtcgagcgtcatcgacctgaccgccaca
tccgccttcactgttggtgagcgggtgttccaccagaaattcggctacggcgcaatcatc
ggcattgagggtgacaagctggaagtcgattttgagaaggccggcgcgaagaaagtcgtg
gcgcggtttgttaccgccgaggacggcgttcccttctag
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